DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ib and C47E12.3

DIOPT Version :10

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_501802.2 Gene:C47E12.3 / 177857 WormBaseID:WBGene00008148 Length:568 Species:Caenorhabditis elegans


Alignment Length:530 Identity:163/530 - (30%)
Similarity:250/530 - (47%) Gaps:93/530 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 KNPLTLGGVSFKEHLK--KIKPILAKGQHFHGATNERQSAVVAAFKHSWAGYKKYAWGHDNLKPI 263
            |||..|    .||.:|  .|..:..:    :|....|:     .|:..|..|.::|:..|.|.||
 Worm    24 KNPFLL----TKEEIKYASISDVDLQ----YGLAKTRE-----MFQFGWDNYMEHAFPADELDPI 75

  Fly   264 ----SQYSHE------------WFGLGLTIVDSLDTMYIMGLDDEFKEGRDWVEQSLRFDTKRDV 312
                ..:.|:            .:.|||  :|:||::.:.|..||||...:.|.:::.|:....|
 Worm    76 HCRGRGHDHDNPDNINVNDVLGDYSLGL--IDTLDSLVVFGDADEFKRAVNLVIKTVSFEKNTTV 138

  Fly   313 NLFEVTIRVLGGLLSAYHLSGDTM--------------FLAKAAELGNRLLPAFQ-SPSNIPYSD 362
            .:||.||||:||||:|:.::.|..              .|..|.:|..||||||. :.:.|||:.
 Worm   139 QVFESTIRVMGGLLAAHMIAADKTNRFGPFYMSDYGGELLTLAHDLAGRLLPAFDGTATGIPYTR 203

  Fly   363 VNL--GDLSAHSPKWSPDSSTSEVTTIQLEFRDLSRSTNISIYEQVAHKVNEKVHDLEKN-HGLV 424
            :||  |.|    |..:..:.||...::.|||..||:......||::|.:||||:.:|... .||.
 Worm   204 INLQKGIL----PGTTNSTCTSGAGSLLLEFGVLSKLLGDDTYERLARRVNEKLWNLRNEVTGLH 264

  Fly   425 PIFINANTGTFRNYATISLGARGDSYYEYLLKQWIQTGRKDNDNLILD-YMQAVDGVLTQLMRRT 488
            ...|:..||.:..:.. .|||..||:|||:||.:|..|.:.:    || |.::...:.|.:.|..
 Worm   265 GNLIDIQTGEWLGHLA-GLGAGIDSFYEYMLKSYILFGNQRD----LDMYNESFARITTYMRRGR 324

  Fly   489 PR------EHWVYIG-ELINGKDFKPKMDHLTCYLPGTLILGHQNGMPDSHLILARDLLDTCYQT 546
            .|      :..:|:. :..:|......:|.|.....|.|:|.   |..|..:         |:  
 Worm   325 SRCSSLEGDIPIYVNVDSRDGSTSNTWIDSLQASFAGVLVLA---GEVDEAV---------CH-- 375

  Fly   547 YMMNPTHLAAEISYFALTEKDDQDIYVKPNDAHNLLRPEFVESLYYFYSITGNRTYQDMGWKIFQ 611
               :..:.|....|..|.|:.:..:.. |:.:...||||||||.|..|:.|.|..||.:|.:|..
 Worm   376 ---HALYYAIWKKYGVLPERFNWQLQA-PDVSFYPLRPEFVESTYLLYTATKNPFYQHVGLEILD 436

  Fly   612 AFETHAKVNAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLFSDD---RKEIDLEQWVFNS 673
            :.||..:|..|:.::.:|.:..   |.|.||||::||||||.||||..|   .|| ..|..:|::
 Worm   437 SLETITRVKCGFATVHDVIDGS---LEDRMESFFLSETLKYLYLLFDVDHPINKE-QQESVLFST 497

  Fly   674 EGHPLPVYPL 683
            |||..|:.||
 Worm   498 EGHIFPISPL 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:460241 150/482 (31%)
C47E12.3NP_501802.2 Glyco_hydro_47 54..504 CDD:460241 150/482 (31%)

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