DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ib and mans-4

DIOPT Version :10

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001255361.1 Gene:mans-4 / 177726 WormBaseID:WBGene00013881 Length:532 Species:Caenorhabditis elegans


Alignment Length:478 Identity:230/478 - (48%)
Similarity:325/478 - (67%) Gaps:25/478 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 LKKIKPILAKGQHFHGATNERQSAVVAAFKHSWAGYKKYAWGHDNLKPISQYSHEWFGLGLTIVD 279
            ||:..|:      |.|.|||||.|:|.||:|:|:||||||||||.|:|:|:...:.|||||||:|
 Worm    68 LKRAPPV------FQGPTNERQKAIVRAFQHAWSGYKKYAWGHDELRPVSKRFDDSFGLGLTIID 126

  Fly   280 SLDTMYIMGLDDEFKEGRDWVEQSLRFDTKRDVNLFEVTIRVLGGLLSAYHLSGDTMFLAKAAEL 344
            ||||..||||::|.::|.:|:.::|.....|.||:||.||||||||||.|||:|:...|.||.:|
 Worm   127 SLDTAIIMGLEEETRDGVEWIRENLNVSPARSVNVFETTIRVLGGLLSGYHLTGEEALLEKATQL 191

  Fly   345 GNRLLPAF-QSPSNIPYSDVNLGDLSAHSPKWSPD-SSTSEVTTIQLEFRDLSRSTNISIYEQVA 407
            |:.|:.|| :|.|.||.|||||.:.:|.||  :.| ||.:|.||:|||||||:..|....||.||
 Worm   192 GDNLIKAFTKSSSLIPKSDVNLDNGNACSP--NRDLSSLAEATTLQLEFRDLTALTGDQKYEDVA 254

  Fly   408 HKVNEKVHDL--EKNHGLVPIFINANTGTFRNYATISLGARGDSYYEYLLKQWIQTGRKDNDNLI 470
            ...:|.||::  :|..||.|.:|:.. |.|:. ::|:||||.|||||||:|||:|| :|..|.|.
 Worm   255 FGASEHVHNVGCKKMDGLCPFYIDGK-GEFKK-SSITLGARADSYYEYLIKQWLQT-KKSIDWLR 316

  Fly   471 LDYMQAVDGVLTQLMRRT-PREHWVYIGELINGKDFKPKMDHLTCYLPGTLILGHQNGM--PDSH 532
            .|::|::..:...|.|:: |...| ::||:.....|.||||||.|:|.|:|:|.|.||:  .:.|
 Worm   317 DDFIQSIAAMKKHLYRQSQPNSIW-FLGEITELAQFYPKMDHLVCFLSGSLVLSHLNGLDHDNEH 380

  Fly   533 LILARDLLDTCYQTYMMNPTHLAAEISYFALTEKDDQ---DIYVKPNDAHNLLRPEFVESLYYFY 594
            |.:|:::.:.|::.| .|||.|..||.:|.:.:..|.   |.|||..|||:|||||.:|:.:|.|
 Worm   381 LEMAKNIGNVCHKMY-ENPTGLGPEIIHFNMEDSSDMTQADTYVKNLDAHSLLRPEAIEAWFYLY 444

  Fly   595 SITGNRTYQDMGWKIFQAFETHAKV-NAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLFS 658
            .:|.::.||:.|||.|::.|.:||| ..||:|:.||...:..| ||.||||:::|||||.|||.:
 Worm   445 RVTKDKKYQEWGWKAFESIEKYAKVETGGYSSIDNVLRKKIKR-RDKMESFFLAETLKYLYLLMA 508

  Fly   659 DDRKEIDLEQWVFNSEGHPLPVY 681
            ||::.:.|::||.|:|.||||:|
 Worm   509 DDQEILPLDRWVLNTEAHPLPIY 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:460241 216/448 (48%)
mans-4NP_001255361.1 Glyco_hydro_47 89..530 CDD:460241 216/448 (48%)

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