DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ib and mans-1

DIOPT Version :9

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_492116.1 Gene:mans-1 / 172510 WormBaseID:WBGene00008411 Length:540 Species:Caenorhabditis elegans


Alignment Length:536 Identity:184/536 - (34%)
Similarity:281/536 - (52%) Gaps:54/536 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 GGIDILNNVEEPV-AQDP--AEPLSEGEQLEQAIK----NPLTLGGVSFKEHLKKIKPILAKGQH 227
            ||.|:....|..| .:|.  .|.:...||.|...|    ||:.:.           ||.:.....
 Worm    32 GGADLYFREENSVHVRDVLIREEIRRKEQDELRRKAEEANPIPIP-----------KPEIGASDD 85

  Fly   228 FHGATNERQSAVVAAFKHSWAGYKKYAWGHDNLKPISQYSH--EWFG---LGLTIVDSLDTMYIM 287
            ..|    |:..|....|.:|.||:|||||.:.|:|.|:..|  ..||   .|.||:|::||:|::
 Worm    86 AEG----RRIFVKQMIKFAWDGYRKYAWGENELRPNSRSGHSSSIFGYGKTGATIIDAIDTLYLV 146

  Fly   288 GLDDEFKEGRDWV-EQSLRFDTKRDVNLFEVTIRVLGGLLSAYHLSGDTMFLAKAAELGNRLLPA 351
            ||.:|:||.|||: :...:...|.|:::||..||..||||||:.|:||.|||.||.::...||||
 Worm   147 GLKEEYKEARDWIADFDFKTSAKGDLSVFETNIRFTGGLLSAFALTGDKMFLKKAEDVATILLPA 211

  Fly   352 FQSPSNIPYS--DVNLGDLSAHSPKW-SPDSSTSEVTTIQLEFRDLSRSTNISIYEQVAHKVNEK 413
            |::||.||.|  |...|....:|  | |..:..||..:|||||..||..|...::.|.|.|:.:.
 Worm   212 FETPSGIPNSLIDAQTGRSKTYS--WASGKAILSEYGSIQLEFDYLSNLTGNPVFAQKADKIRDV 274

  Fly   414 VHDLEKNHGLVPIFINANTGTFRNYATISLGARGDSYYEYLLKQWIQTGRKDNDNLILDYMQAVD 478
            :..:||..||.||:|..:..........|:||..||:|||||||||.||:|| |....:|.:|:.
 Worm   275 LTAMEKPEGLYPIYITMDNPPRWGQHLFSMGAMADSWYEYLLKQWIATGKKD-DRTKREYEEAIF 338

  Fly   479 GVLTQLMRRTPREHWVYIGELINGKDFKPKMDHLTCYLPGTLILGHQN----GMPDSHLILARDL 539
            .:..:::.::.:.:..|..:: ||...:...:||.|:..|.::|...|    .:.|.::.|.:::
 Worm   339 AMEKRMLFKSEQSNLWYFAKM-NGNRMEHSFEHLACFSGGMVVLHAMNEKNKTISDHYMTLGKEI 402

  Fly   540 LDTCYQTYMMNPTHLAAEISYF-----ALTEKDDQDIYVKPNDAHNLLRPEFVESLYYFYSITGN 599
            ..||:::|..:.|.:..|...|     |.||        :..|::.:||||.||:.:|.:..|.:
 Worm   403 GHTCHESYARSTTGIGPESFQFTSSVEAKTE--------RRQDSYYILRPEVVETWFYLWRATKD 459

  Fly   600 RTYQDMGWKIFQAFETHAKVNAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLFSDDRKEI 664
            ..|:...|...|..|.:.|..|||:.:.||..: |....|:.:||..:|..||.||:||:| ..:
 Worm   460 EKYRQWAWDHVQNLEEYCKGTAGYSGIRNVYES-SPEQDDVQQSFLFAELFKYLYLIFSED-NIL 522

  Fly   665 DLEQWVFNSEGHPLPV 680
            .|:|||||:|.||..:
 Worm   523 PLDQWVFNTEAHPFRI 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:279825 166/455 (36%)
mans-1NP_492116.1 Glyco_hydro_47 96..538 CDD:279825 166/455 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R728
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.860

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