DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ib and Edem2

DIOPT Version :10

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:XP_314865.4 Gene:Edem2 / 1275602 VectorBaseID:AGAMI1_014653 Length:806 Species:Anopheles gambiae


Alignment Length:486 Identity:144/486 - (29%)
Similarity:234/486 - (48%) Gaps:77/486 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 NERQSAVVAAFKHSWAGYKKYAWGHDNLKPIS---QYS---------HEWFG-LGLTIVDSLDTM 284
            ||.:......|.|::..|...|:..|.|.|:|   :|.         .:..| ..:|:||:|||:
Mosquito    60 NELKEEAREMFYHAYRAYMDNAYPADELMPLSCAGRYRGVTPSRGDLDDTLGNFSMTLVDTLDTL 124

  Fly   285 YIMGLDDEFKEGRDWVEQSLRFDTKRDVNLFEVTIRVLGGLLSAYHLS------GDTM------F 337
            .::|..:||:.....|.:.::||....|::||..||::|||||.:.|:      .|.|      .
Mosquito   125 VVLGDLEEFEHAVKLVIKDVKFDNDIIVSVFETNIRMIGGLLSGHILAEYVQKQADVMTWYRGEL 189

  Fly   338 LAKAAELGNRLLPAFQSPSNIPYSDVNL-GDLSAHSPKWSPDSSTSEVTTIQLEFRDLSRSTNIS 401
            |..|.:||.||||||.:.:.||::.||| ..:...:.:.|.::.|:...||.|||..|||.:...
Mosquito   190 LEMAKDLGYRLLPAFNTSTGIPHARVNLKHGMKVEALRHSRETCTACAGTILLEFAALSRLSGEP 254

  Fly   402 IYEQVAHKVNEKVHDL-EKNHGLVPIFINANTGTFRNYATISLGARGDSYYEYLLKQWIQTGRKD 465
            |:|..||...:.:..: .::..|:...:|.::|.:....: .:||..||||||.||.:|..|.: 
Mosquito   255 IFEVKAHAAMDALWKMRHRSSELMGTVLNVHSGDWIRRES-GVGAGIDSYYEYCLKSYILLGDE- 317

  Fly   466 NDNLILDYMQAVDGVLTQLMRRTPREHWVYIGE---LINGKDFKPK------MDHLTCYLPGTLI 521
                  .|:...:.....:|:        ||.:   |::.:..:|.      ||.|..:.||..:
Mosquito   318 ------RYLARFNRHYHAIMK--------YISQGPMLLDVQMHRPHTKTRNFMDALLAFWPGLQV 368

  Fly   522 L-GHQNGMPDSHLILARDLLDTCYQTYMMNPTHLAAEISYFALTEKDDQDIYVKPNDAHNLLRPE 585
            | |.......:|.:|        ||...|: |.:....::         |..|.....|  ||||
Mosquito   369 LSGDLKPAVQTHEML--------YQVMQMH-TFIPEAFTF---------DFQVHWGQHH--LRPE 413

  Fly   586 FVESLYYFYSITGNRTYQDMGWKIFQAFETHAKVNAGYTSMGNVKNTQSTRLRDLMESFWMSETL 650
            |:||.|:.|..||:..|...|.|..:|.:.||:|..||.::.:|:   :.:..|.|:|:.:|||.
Mosquito   414 FIESTYFLYRATGDHYYLHAGKKALKALQKHARVPCGYAAVNDVR---TGKHEDRMDSYVLSETF 475

  Fly   651 KYFYLLFSDDRKEI-DLEQWVFNSEGHPLPV 680
            ||.:|||||....| ::|.::|.:|.|.||:
Mosquito   476 KYLFLLFSDPADLILNIEDFIFTTEAHLLPL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:460241 141/475 (30%)
Edem2XP_314865.4 None

Return to query results.
Submit another query.