DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ib and man1c1

DIOPT Version :9

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:XP_031752782.1 Gene:man1c1 / 100485889 XenbaseID:XB-GENE-6076350 Length:617 Species:Xenopus tropicalis


Alignment Length:661 Identity:212/661 - (32%)
Similarity:342/661 - (51%) Gaps:77/661 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QRNLIILGITGFCVTVLLCLSGDQLLAASLKDVDTKAEV---AAYQMPLPNPHHHPGVDKDVPKD 99
            |:.:.:|.::||   :.||. |...|   |.|......:   :|:...:...|.:.|  |.:.|.
 Frog    20 QKFIFLLFLSGF---ITLCF-GTLFL---LPDTSKFKRIFLSSAHNQNIEKLHSYAG--KKMSKK 75

  Fly   100 TAAVPVPADKRAPRVEAVS-DKFNELVAYGEANSAENVARLPETVAAEGLPQASAMAVALPPPDS 163
            |........:.:...:..| ||||                       ..:|..:.:|        
 Frog    76 TVEDQKSIIRNSQHEKWKSKDKFN-----------------------VDVPSLAVIA-------- 109

  Fly   164 NKEQDIGGIDILNNVEEPVAQDPAEPLSEGEQLEQAIKNPLTLGGVSFKEHLKKIKPILAKGQHF 228
            ||.......::..|.|..:||.        :||:.      |....:|:::| |..|:.:|.:..
 Frog   110 NKNDRAEKEEVFINKEHIIAQK--------DQLKS------TFDYKTFRKNL-KYPPMGSKHEPK 159

  Fly   229 HGATNERQSAVVAAFKHSWAGYKKYAWGHDNLKPISQYSH--EWFG--LGLTIVDSLDTMYIMGL 289
            .....|::..|......:|..||:||||.:.|:|:::..|  ..||  .|.||||:|||::|||:
 Frog   160 DIDMQEKRKKVKEMMIFAWNSYKQYAWGENELRPLTKDGHFGSLFGGLKGATIVDALDTLFIMGM 224

  Fly   290 DDEFKEGRDWVEQSLRFDTKRDVNLFEVTIRVLGGLLSAYHLSGDTMFLAKAAELGNRLLPAFQS 354
            .:||:|.:.|:|.||..:...:.:||||.||.:|||||||.|||..:|..||..|||:|||||.:
 Frog   225 KEEFEEAQKWIETSLDLNVNGEASLFEVNIRYIGGLLSAYFLSGKEVFRDKAIGLGNKLLPAFST 289

  Fly   355 PSNIPYSDVNLGDLSAHSPKWSPDSST--SEVTTIQLEFRDLSRSTNISIYEQVAHKVNEKVHDL 417
            |:.||...:|||:....|..|:...|:  :|..|:.|||..||..:..:|:.:..:.:.:.:..:
 Frog   290 PTGIPRGIINLGNGLTWSWGWASAGSSILAEFGTLHLEFVQLSELSGNTIFTEKVNGIRKLLSKI 354

  Fly   418 EKNHGLVPIFINANTGTFRNYATISLGARGDSYYEYLLKQWIQTGRKDNDNLILDYMQAVDGVLT 482
            ||.|||.|.:.:..:|.:..: .:|||..|||:||||:|.|:.:.|:||:...: |..|::.:.|
 Frog   355 EKPHGLYPNYFSPISGNWVQH-HVSLGGLGDSFYEYLIKSWLMSARQDNEAKSM-YYDALEAIET 417

  Fly   483 QLMRRTPREHWVYIGELINGKDFKPKMDHLTCYLPGTLILGHQNG---MPDSHLILARDLLDTCY 544
            .|:|::| ....||.|. .|.....||.||||:..|...||.::.   ..|.::.||.::.:||:
 Frog   418 HLIRKSP-GGLTYIAEW-RGGILDHKMGHLTCFAAGMFALGARDAPAQKRDHYMELAAEIANTCH 480

  Fly   545 QTYMMNPTHLAAEISYFALTEKDDQDIYVKPNDAHNLLRPEFVESLYYFYSITGNRTYQDMGWKI 609
            ::|....|.|..|:..|....:....   :.::.:.:||||..||..|.:.:|.|..|::.||:|
 Frog   481 ESYARTDTKLGPEVFRFDFGAEATAS---RLSERYYMLRPEVAESYVYLWRLTHNPKYREWGWEI 542

  Fly   610 FQAFETHAKVNAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLFSDDRKEIDLEQWVFNSE 674
            .||.|.:.::.:|::.:.:|.:| |....::.:||:|||||||.|||||:| ..:.||.||||:|
 Frog   543 VQALEKYCRIESGFSGIRDVYST-SPNHDNVQQSFFMSETLKYLYLLFSED-DLLSLEDWVFNTE 605

  Fly   675 GHPLPVYPLKT 685
            .||||:..||:
 Frog   606 AHPLPITHLKS 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:279825 170/446 (38%)
man1c1XP_031752782.1 Glyco_hydro_47 173..611 CDD:396217 170/446 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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