DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ib and edem3

DIOPT Version :10

Sequence 1:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster
Sequence 2:XP_017949129.2 Gene:edem3 / 100145667 XenbaseID:XB-GENE-5811499 Length:918 Species:Xenopus tropicalis


Alignment Length:508 Identity:149/508 - (29%)
Similarity:240/508 - (47%) Gaps:99/508 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 GQHFHGATNER----QSAVVAAFKHSWAGYKKYAWGHDNLKPIS--------------------Q 265
            ||.....|.|.    :|.|:..|.|::..|.::|:..|.|.|::                    :
 Frog    24 GQGRAAVTKEEKAQLRSQVLEMFDHAYGSYMQHAYPADELMPLTCRGRIRGQEPSRGDVDDALGK 88

  Fly   266 YSHEWFGLGLTIVDSLDTMYIMGLDDEFKEGRDWVEQSLRFDTKRDVNLFEVTIRVLGGLLSAYH 330
            :|       ||::|:|||:.::...:||::....|...:..|....|::||..||||||||..:.
 Frog    89 FS-------LTLIDTLDTLVVLNKTNEFEDAVRKVITDVNLDNDIVVSVFETNIRVLGGLLGGHS 146

  Fly   331 L------SGDTM------FLAKAAELGNRLLPAFQSPSNIPYSDVNLGDLSAHSPK----WSPDS 379
            |      :.|.|      .|..|.|||.:|||||.:.|.:||..:|| .....||:    ...|:
 Frog   147 LAIMLKENSDRMQWYNDELLHMAKELGYKLLPAFNTTSGLPYPRINL-KFGIRSPEARTGTETDT 210

  Fly   380 STSEVTTIQLEFRDLSRSTNISIYEQVAHKVNEKVHD-LEKNHGLVPIFINANTGTFRNYATISL 443
            .|:...|:.|||..|||.|.|:::|:.|.|..:.:.: .:::..||.:.||.:||.:....: .:
 Frog   211 CTACAGTMILEFAALSRFTGIAVFEEHARKALDFLWEKRQRSSNLVGVTINIHTGDWVRKDS-GV 274

  Fly   444 GARGDSYYEYLLKQWIQTGRKDNDNLILDYMQAVDGVLTQLMRRTPREHWVYIGE---LINGKDF 505
            ||..|||||||||.::..|   :|:    |::..:.....:||        ||.:   |::....
 Frog   275 GAGIDSYYEYLLKAYVLLG---DDS----YLERFNTHYDAIMR--------YISQPPLLLDVHIH 324

  Fly   506 KPK------MDHLTCYLPGTLILGHQNGMPDSHLILARDLLDTCYQTYMMNPTHLAAEISYFALT 564
            ||.      ||.|..:.||..:|...          .|..::|....|.:...|       ..|.
 Frog   325 KPMLTARTWMDSLLAFFPGLQVLKGD----------IRPAIETHEMLYQVIKKH-------NFLP 372

  Fly   565 EKDDQDIYVKPNDAHNLLRPEFVESLYYFYSITGNRTYQDMGWKIFQAFETHAKVNAGYTSMGNV 629
            |....|..|  :.|.:.|||||.||.|:.|..||:..|.::|..:......:|:|..|:.:   |
 Frog   373 EAFTTDFRV--HWAQHPLRPEFAESTYFLYKATGDPYYLEVGRTLIDNLNKYARVPCGFAA---V 432

  Fly   630 KNTQSTRLRDLMESFWMSETLKYFYLLFSDDRKEI--DLEQWVFNSEGHPLPV 680
            |:.::....|.|:||:::|..||.||||| :|:::  |:|.::|.:|.|.||:
 Frog   433 KDVRTGSHEDRMDSFFLAEMFKYLYLLFS-EREDLIFDIESYIFTTEAHLLPL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:460241 142/485 (29%)
edem3XP_017949129.2 Glyco_hydro_47 45..484 CDD:460241 142/485 (29%)
PA_EDEM3_like 650..776 CDD:239041
Blue background indicates that the domain is not in the aligned region.

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