DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11873 and Bicral

DIOPT Version :9

Sequence 1:NP_001263051.1 Gene:CG11873 / 43435 FlyBaseID:FBgn0039633 Length:3003 Species:Drosophila melanogaster
Sequence 2:NP_001100358.1 Gene:Bicral / 301235 RGDID:1305680 Length:1078 Species:Rattus norvegicus


Alignment Length:1329 Identity:251/1329 - (18%)
Similarity:419/1329 - (31%) Gaps:422/1329 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1328 KLSG-QVTHPASSMLGMTSTTTTMSTMKPPANLPAKQNEVVSFPQ--LPLNSQVLIQQQPMISAQ 1389
            |.|| .||:...|.....|.....:...|.::|....|::...|.  |||.|.:...:..:.|:.
  Rat    29 KSSGDDVTNAGYSAANSNSIFANSTNADPKSSLKGVSNQLGEGPSDGLPLASSLQFLEDELESSP 93

  Fly  1390 LQPQL---QPVTVPVSLPTQPVPIPSPAPAPQL---ANNGQQRYIALPPIDPTTQQLFC-LNSVT 1447
            | |.|   ||..: :....|...|.....|.:.   |:.|..:..|...:.|::...|. .::|:
  Rat    94 L-PDLSEDQPFDI-LQKSLQEANITEQTLAEEAYLDASIGSSQQFAQAQLHPSSSASFTQASNVS 156

  Fly  1448 NQITAMSAGQTAASIGPTERLLIAPAGINAQQLAQCLQLGQLHFNDVNPLPAQQQQQQVATTSSS 1512
            |.     :|||...||.|.    .|.|.:.......:|.|.:              |.|.     
  Rat   157 NY-----SGQTLQPIGVTH----VPVGASFASNTVGVQHGFM--------------QHVG----- 193

  Fly  1513 MTLSMPLRPQPPQQQIVHPIQPITNGLAITTTASSTLTTTTS---TTSLTTVTKQVANVAPIIDQ 1574
              :|:|.:..|...||               :.|..:....|   ..|:.|:..        :|.
  Rat   194 --ISVPSQHLPNSSQI---------------SGSGQIQLIGSFGNQPSMMTINN--------LDG 233

  Fly  1575 SKAKLE-PAKAATSGAGGGAVVKKK----------PVRKPKATPTNASELANLKNASVVKPMPKL 1628
            |:..|: ..:.|.|...||.:|.::          |...|.|.|....  .|..|.....|:..:
  Rat   234 SQIILKGSGQQAPSSVSGGLLVHRQTPNGNSLFGNPTSSPGAQPVTVP--FNSTNFQASLPVHNI 296

  Fly  1629 DPLSQK---PNNNPVQI-VQPN-VASGKQMIVVGSSSCTTTTTTTMSASIQPFQTTSGTKLVGVT 1688
              :.|:   ||:|.|.| :||. :..|:|           :|....|..:|......|......:
  Rat   297 --IIQRGLAPNSNKVPINIQPKPIQMGQQ-----------STYNVNSLGLQQHHVQQGISFASAS 348

  Fly  1689 VPM-QQQQPTGTAAILQQQQQQRTSFSLTATTVATPAPMPSPTVASGVSQLQMQQLPSQQAQQQL 1752
            .|. ....|..:..|:.||..::              |:.|..|:|....:.:.. |..|..   
  Rat   349 SPQGSVVGPHMSVNIVNQQNARK--------------PVTSQAVSSAGGSIVIHS-PMGQPH--- 395

  Fly  1753 QPQQQQQLHAPKQQQPQPNTVSRVQTI--QL--TPQMQQIFKQVQMQIQFLTIKLQNKSTFL--- 1810
              ..|.|...|.......|:|..||||  ||  |...|.|..||..:...|.   :|.|..|   
  Rat   396 --TPQSQFLIPTSLSVSSNSVHHVQTINGQLVQTQPSQLISGQVASEHVMLN---RNSSNMLRTN 455

  Fly  1811 -PVSPE-----------IDSATIAAYNKPMTDAEINLALQRLFAEQHRI-LASGKEVPTPEGMLP 1862
             |.:.:           :...|.|....|:.   :|.|..::...|..: .||...:....|...
  Rat   456 QPYAGQMLNNQSAAVQLVSGQTFATSGSPVI---VNHASPQIVGGQMPLQQASPTVLHLSPGQSS 517

  Fly  1863 TANGTGGFSLMPQPVQQQQQQQQQQLQSTVPEPLK--TIVPANVVQPNNHSSTPAGAATSGATTA 1925
            .:.|..||:.|..             .|::..|.:  .:..|:...|.      .|.|.....:.
  Rat   518 VSQGRPGFATMAS-------------VSSMSGPARFPAVSSASTAHPT------LGPAVQSGASG 563

  Fly  1926 ANIQQNITQRIHIYPMQHQQQQQQQQQQQQQQPQHQQQQPQHQLQQTGAKPKQAQPKPPPQQEQQ 1990
            :|.                                           ||.:..||...|.|     
  Rat   564 SNF-------------------------------------------TGDQLTQANRTPVP----- 580

  Fly  1991 SQLQIKPKEPANRSKVTSQQLQQNPQPPNGTINMLPQKVSMMPVVQQQQQQQPQQHQQQPMLNKS 2055
              :.:..:.|.:.||                   .|..:|..|..|||                 
  Rat   581 --VSVSHRLPVSASK-------------------SPSTLSSTPGTQQQ----------------- 607

  Fly  2056 GPPPLIFASSTNMLSNSNSNNLHNSNSAMQVNNMLPLPPLQPQQQPQPQLQQPPTP-ILPPVAPT 2119
                 .|..:....                :|...|:|...|..:....|:||..| :|....|.
  Rat   608 -----FFCQAPKKC----------------LNQTAPIPTPIPTSKTTDSLRQPQIPGLLSTALPG 651

  Fly  2120 MAMG--VAPGPMGNLVPSLP-TIPSLPLYMPSKMDEMPTQK----PKIARLSLFVRQLEVDQESC 2177
            ...|  :.|.|:|...|... ::.|.|.....::|....||    .::.:.:..::||:.||...
  Rat   652 QDCGSKIMPAPLGTTQPQQENSVGSSPSQTAVQVDSHSGQKRPAAKQLTKGAFILQQLQRDQAHA 716

  Fly  2178 LKPDYVKPFRTKDEAVKRLIRYHCMHENDVELPSDE-----DEEFESTALEFQDKFRQLNGKFQE 2237
            :.|| ...||:..:.|:||:.||....:   :|::|     |.|||..|.:...:...:..|::.
  Rat   717 VTPD-KSQFRSLTDTVQRLLSYHVCQGS---MPTEEDLSKVDSEFEEVATQLLKRTHAMLNKYRS 777

  Fly  2238 ILMQESTLPHRTSELLQMQQLMIDDLKGEINEIRTAEKELEQQLKEEQTSEKSTAESDVLSEAKV 2302
            :|::::...:.::|:     :|||.:   .|:...|....:::|   ...:....::|.....|:
  Rat   778 LLLEDAMRINPSAEM-----VMIDRM---FNQEERASLSRDKRL---ALVDPEGFQADFCCSFKL 831

  Fly  2303 KEEIKQEPIDKSAQPDGVVDKFDLLKNSADVNKAFSKSQPQQTTTVKQEESNESGEPSV------ 2361
            .|...:.|:|:|.|                     .:|:......|.:.:|.:..:|.|      
  Rat   832 DEAAPETPLDRSDQ---------------------HRSKTSSLHQVPRAQSRDRAKPGVAEATNH 875

  Fly  2362 ----------------NGSVKSEGHDKESSKYIKKDYDNFDIESELTTSFIMKKVENKAALAKSA 2410
                            |.|.|||||    |:.:|.|                          |..
  Rat   876 DQFHLVPNHIVVSAEGNISKKSEGH----SRTLKFD--------------------------KGV 910

  Fly  2411 ENRYQ---ERNMMDQQQQQQHIKANGGDPVDQDDGWYCLQKELNLMNNDHMQQSQQQLNGNQQHL 2472
            ..:|:   |    |:..::...||:|..|..:.       ....|...||         |::..|
  Rat   911 LGQYRGPPE----DKGGRRDPAKASGCSPGPEG-------HRKTLPRPDH---------GSESKL 955

  Fly  2473 P----INRQPAPQQSHFLD----NSNSNN------MMGNSNHMSDLFPNGCIDKSNQSTTSSSN- 2522
            |    .:....|....|.|    ||..|.      |.|:.....||.....::|:.::.....| 
  Rat   956 PGILASSHMEMPCLDSFQDKALRNSPKNEVLHTDIMKGSGEPQPDLQLTKSLEKTFKNILELKNA 1020

  Fly  2523 ---------SSCVSESLPGSNPVKTVSSC 2542
                     |..|....|..:|:.:..:|
  Rat  1021 GRPQNDPAASGAVDLDFPSFSPMASQENC 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11873NP_001263051.1 GLTSCR1 2170..2271 CDD:291902 26/105 (25%)
BicralNP_001100358.1 GLTSCR1 712..812 CDD:405846 26/111 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I11693
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45374
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15572
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.100

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