DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul5 and CDC53

DIOPT Version :9

Sequence 1:NP_651665.2 Gene:Cul5 / 43434 FlyBaseID:FBgn0039632 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_010150.1 Gene:CDC53 / 851424 SGDID:S000002290 Length:815 Species:Saccharomyces cerevisiae


Alignment Length:697 Identity:169/697 - (24%)
Similarity:306/697 - (43%) Gaps:91/697 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 VRKLMLDSWNKHIFHDIKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNLSSNAED----KL 273
            |..|.|.:|.:.:|...|..|....:..|...|.|.......:....:|.|.|..:.:|    .|
Yeast   153 VNTLCLMTWKEVMFDPSKDVLINELLDQVTLGREGQIIQRSNISTAIKSLVALGIDPQDLKKLNL 217

  Fly   274 EIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSSFSILTYT 338
            .:|.:.||..:||.|.|:|...:.:..:::.|..|:..|...::.||.....|.:..:...|:..
Yeast   218 NVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTKKPLSMA 282

  Fly   339 LVNVLIVDHLNSIIAECPALIRDYETERLNLMFRLMDRVMHGVGVEPMMGDL-QRHIMSAG---L 399
            |..|||.||:..:..|...|:...:.|::..::.|:.|   ...:.|.|..: :.::...|   :
Yeast   283 LNKVLITDHIEKLENEFVVLLDARDIEKITSLYALIRR---DFTLIPRMASVFENYVKKTGENEI 344

  Fly   400 ADMLSASE---------------VITQDS---EKYVERLLELFNKFSDLVRNAFNDDPRFLTARD 446
            :.:|:..:               ::|..|   :.|:::|||:.:.||.:...:|.||.....|.|
Yeast   345 SSLLAMHKHNIMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFSKIFNESFPDDIPLAKALD 409

  Fly   447 IAFKTVVNDTSVFKMELPTSIANRGVKYTAPE---SKCPELLANYCDMLLRRTPLSKRLTSEQI- 507
            .|....:|   :.:..||..         :|:   ||..|:||.|.|:||      |:.|..:: 
Yeast   410 NACGAFIN---INEFALPAG---------SPKSATSKTSEMLAKYSDILL------KKATKPEVA 456

  Fly   508 -DARLRDVLLVLKYVNNKDVFMRYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMPADYVNRLA 571
             |....|::.:.||:.:||.|..:::....:|||.|||..:|.||:|::.| :.....:|..::.
Yeast   457 SDMSDEDIITIFKYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENIIQRL-QAANSMEYTGKIT 520

  Fly   572 RMFQDIKVSEDLNTQFRTSI--------SRHDAINIKILNAGAWARCSERVSVSLPIELEDYIPD 628
            :|||||::|:.|...|..::        :::..:...:|....|....:.|...||.||......
Yeast   521 KMFQDIRLSKILEDDFAVALKNEPDYSKAKYPDLQPFVLAENMWPFSYQEVEFKLPKELVPSHEK 585

  Fly   629 VEEFYKKKHSGRKLQWYHHMSNGTI-TFVNNFGR--YDLDVTTFQMAVLFAWNQRQHDKISYENL 690
            ::|.|.:||:||.|:|...:..|.: ..:...||  ::..||.||||:|..:|..  |.::.||:
Yeast   586 LKESYSQKHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTLFQMAILLLYNDA--DVLTLENI 648

  Fly   691 RLATELPDPELRRTLWSLVAFPKIKK-------------QILLMEP-AAISSPKDFAENTMFYIN 741
            :..|.|....:...:...:.|..|::             |..|..| .|:.:..:||....   |
Yeast   649 QEGTSLTIQHIAAAMVPFIKFKLIQQVPPGLDALVKPETQFKLSRPYKALKTNINFASGVK---N 710

  Fly   742 QEFAIVKNGKSQRRGKLNLIGRLQLS-TERSQQEDNQSIVQLRILRTQEAIIKIMKVRKRMNNAA 805
            .....:..|.....|  |.:|..:|: .||.::|.|..    |.:..:..|::|||.::.:.:..
Yeast   711 DILQSLSGGGHDNHG--NKLGNKRLTEDERIEKELNTE----RQIFLEACIVRIMKAKRNLPHTT 769

  Fly   806 LQGELIDILKNMFLPSKKMIKEQLEWLIENKYMRRDDDDINMFIYVA 852
            |..|.|......|.....|:|..::.||:..|::|.||. ..:.|:|
Yeast   770 LVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQRGDDG-ESYAYLA 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul5NP_651665.2 Cullin 33..743 CDD:279260 141/585 (24%)
CULLIN 520..655 CDD:214545 40/143 (28%)
Cullin_Nedd8 779..846 CDD:214883 17/66 (26%)
CDC53NP_010150.1 COG5647 7..815 CDD:227934 168/695 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11932
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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