DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul5 and AT1G59790

DIOPT Version :9

Sequence 1:NP_651665.2 Gene:Cul5 / 43434 FlyBaseID:FBgn0039632 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_176188.1 Gene:AT1G59790 / 842272 AraportID:AT1G59790 Length:374 Species:Arabidopsis thaliana


Alignment Length:468 Identity:91/468 - (19%)
Similarity:164/468 - (35%) Gaps:146/468 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RDRDI-FEEVWPDKRRIVLKLLR------QDTVSQREWQDLFFGVHFVCLWDEKGAAKIYDCLQQ 65
            |.|.| |||.|.:.::.:.||:|      :.|....|...|:..::.:|:.....:.::|:..::
plant     8 RPRQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRSDYSQQLYEKYRK 72

  Fly    66 DIVEFIVQAQSQVQAQRGEQALLATYIVEWR----------KFF-------TQSNYLPLPFRQLE 113
            .|.::.:|.......::.::.:|...:..|.          |||       .:.:.:|:|  .|:
plant    73 VIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVRRSKIPIP--SLD 135

  Fly   114 QSPQVKPSSSGSSSSASVSASGASTSAAAAAAATSCSGQAGKSGASTSAAAGASTSAAAAAASTS 178
            :                              ...:|                             
plant   136 E------------------------------VGLTC----------------------------- 141

  Fly   179 ASTSSAAAAAAASGSGSSSSSTSTSKKNPTEDSPVRKLMLDSWNKHIFHDIKHRLQESAMKIVHA 243
                                                  .||.    ::.:::...:|..:.::|.
plant   142 --------------------------------------FLDL----VYCEMQSTAKEVVIALIHK 164

  Fly   244 ERNGDAYDAQLVVGVRESYVNLSSNAEDKLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAY 308
            ||.|:..|..||..|.:.||   .|....||.|.|:||...|:.|..:|..|::...:|:....|
plant   165 EREGEQIDRALVKNVLDIYV---ENGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDY 226

  Fly   309 MKYADSKLREEEVRAKRYLEPSSFSILTYTLVNVLIV----DHLNSIIAECPALIRDYETERLNL 369
            |...:..|:.|..|...||...:...|...:.|.|:|    :.|.:..:...||:||.:...|:.
plant   227 MIKVEECLKMERERVTHYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSR 291

  Fly   370 MFRLMDRVMHGVGVEPMMGDL-QRHIMSAGLADMLSASEVITQDSEKYVERLL-ELFNKFSDLVR 432
            ::||...:...:|   .:.|| ::||...|.|       :|.|..:|...:|| ||.|||...|.
plant   292 IYRLYLPIPKRLG---RVADLFKKHITEEGNA-------LIKQADDKTTNQLLIELHNKFIVYVI 346

  Fly   433 NAFNDDPRFLTAR 445
            ..|.:...|...|
plant   347 ECFQNHTLFHKVR 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul5NP_651665.2 Cullin 33..743 CDD:279260 80/436 (18%)
CULLIN 520..655 CDD:214545
Cullin_Nedd8 779..846 CDD:214883
AT1G59790NP_176188.1 Cullin 47..>357 CDD:279260 78/425 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1040292at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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