DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul5 and cul5

DIOPT Version :9

Sequence 1:NP_651665.2 Gene:Cul5 / 43434 FlyBaseID:FBgn0039632 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001072836.1 Gene:cul5 / 780297 XenbaseID:XB-GENE-484069 Length:780 Species:Xenopus tropicalis


Alignment Length:850 Identity:510/850 - (60%)
Similarity:629/850 - (74%) Gaps:94/850 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FEEVWPDKRRIVLKLLRQDTVSQREWQDLFFGVHFVCLWDEKGAAKIYDCLQQDIVEFIVQAQSQ 77
            ||:.|...|.||||||||::|::::|.|||..||.|||||:||.|||:..|::||::||.|||::
 Frog    15 FEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKEDILDFIKQAQAR 79

  Fly    78 VQAQRGEQALLATYIVEWRKFFTQSNYLPLPFRQLEQSPQVKPSSSGSSSSASVSASGASTSAAA 142
            |.:.:.:.|||..|||||||||||.:.||.||.|||.:                           
 Frog    80 VLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEIT--------------------------- 117

  Fly   143 AAAATSCSGQAGKSGASTSAAAGASTSAAAAAASTSASTSSAAAAAAASGSGSSSSSTSTSKKNP 207
                     ..||.|                                            ::||:.
 Frog   118 ---------LMGKQG--------------------------------------------SNKKSN 129

  Fly   208 TEDSPVRKLMLDSWNKHIFHDIKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNLSSNAEDK 272
            .|||.|||||||:||:.||.:||:|||:||||:|||||.|:|:|:|||:|||||||||.||.|||
 Frog   130 VEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDK 194

  Fly   273 LEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEP----SSFS 333
            |:|||:|||.|||.:|..|||.::....|:|||..||||||:||:|||.||.||||.    :|..
 Frog   195 LQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEENRALRYLETRRECNSVQ 259

  Fly   334 ILTYTLVNVLIVDHLNSIIAECPALIRDYETERLNLMFRLMDRVMHGVGVEPMMGDLQRHIMSAG 398
            .|....||.|:.....:|:|||..:|:..|||:|:|||.|||:|.:  |:|||:.||:.||:|||
 Frog   260 ALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPN--GIEPMLKDLEEHIVSAG 322

  Fly   399 LADMLSASEVITQDSEKYVERLLELFNKFSDLVRNAFNDDPRFLTARDIAFKTVVNDTSVFKMEL 463
            ||||::|:|.||.|||||||:||.|||:||.||:.||.||||||||||.|:|.||||.::||:||
 Frog   323 LADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLEL 387

  Fly   464 PTSIANRGVKYTAPESKCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFM 528
            |......|:| |.||||||||||||||||||:|||||:||||:|:|:|::||||||||.||||||
 Frog   388 PLKQKGVGLK-TQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFM 451

  Fly   529 RYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMPADYVNRLARMFQDIKVSEDLNTQFRTSISR 593
            ||||.||||||||..|||||.||::|||||||||||||||:|||||||||||||||..|:.....
 Frog   452 RYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKN 516

  Fly   594 H------DAINIKILNAGAWARCSERVSVSLPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGT 652
            :      |::||||||||||:|.||:|.||||.||||.||:|||||||.||||||.|:|.||||.
 Frog   517 NKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGI 581

  Fly   653 ITFVNNFGRYDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPELRRTLWSLVAFPKIKKQ 717
            |||.|..|:|||:|||||:|||||||||..:|||:|||:|||||||.||||||||||||||:|:|
 Frog   582 ITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQ 646

  Fly   718 ILLMEPAAISSPKDFAENTMFYINQEFAIVKNGKSQRRGKLNLIGRLQLSTERSQQEDNQSIVQL 782
            :|..|| .::|||||.|.|:|.:||||:::||||.|:|||:||||||||:|||.::|:|:.||||
 Frog   647 VLSYEP-TVNSPKDFTEGTLFSVNQEFSLIKNGKVQKRGKINLIGRLQLTTERMREEENEGIVQL 710

  Fly   783 RILRTQEAIIKIMKVRKRMNNAALQGELIDILKNMFLPSKKMIKEQLEWLIENKYMRRDDDDINM 847
            ||||||||||:|||:||::.||.||.||::||||||||.|||||||:|||||:||::||:.|||.
 Frog   711 RILRTQEAIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDESDINT 775

  Fly   848 FIYVA 852
            |||:|
 Frog   776 FIYMA 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul5NP_651665.2 Cullin 33..743 CDD:279260 418/719 (58%)
CULLIN 520..655 CDD:214545 103/140 (74%)
Cullin_Nedd8 779..846 CDD:214883 50/66 (76%)
cul5NP_001072836.1 Cullin 19..672 CDD:366357 429/736 (58%)
Cullin_Nedd8 713..770 CDD:371133 42/56 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 727 1.000 Domainoid score I112
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2597
Inparanoid 1 1.050 889 1.000 Inparanoid score I388
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1040292at2759
OrthoFinder 1 1.000 - - FOG0005530
OrthoInspector 1 1.000 - - oto103956
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2468
SonicParanoid 1 1.000 - - X3952
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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