DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul5 and AT1G43140

DIOPT Version :9

Sequence 1:NP_651665.2 Gene:Cul5 / 43434 FlyBaseID:FBgn0039632 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_175007.2 Gene:AT1G43140 / 3767291 AraportID:AT1G43140 Length:721 Species:Arabidopsis thaliana


Alignment Length:649 Identity:169/649 - (26%)
Similarity:297/649 - (45%) Gaps:87/649 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 SWNKHIFHDIKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNLSSNAEDKLEIYRENFEMAY 284
            |::..::.:|:...::..:.::|.||.|:..|..||..|.:.|   ..|...::.||.|:||...
plant   144 SFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVY---CGNGVGQMVIYEEDFESFL 205

  Fly   285 LKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSSFSILTYTLVNVLIVDHLN 349
            |:.|..:|..|::...||:....||..|:..|:.|:.|...||..::...|...:.|.|:|....
plant   206 LQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYLHSTTEPKLVEKVQNELLVVVAK 270

  Fly   350 SII----AECPALIRDYETERLNLMFRLMDRVMHGVGVEPMMGDLQRHIMSAGLADMLSASEVIT 410
            .:|    :.|.||:||.:...|:.|:||...:..  |:||:....::|:.:.|.|.:..|::..|
plant   271 QLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQ--GLEPIADLFKQHVTAEGNALIKQAADAAT 333

  Fly   411 -QD---SEKYVERLLELFNKFSDLVRNAFNDDPRFLTARDIAFKTVVNDTSVFKMELPTSIANRG 471
             ||   |:..|.:.:||.:|:...|...|.....|......||:...|.|          :|.  
plant   334 NQDASASQVLVRKEIELHDKYMVYVDECFQKHSLFHKLLKEAFEVFCNKT----------VAG-- 386

  Fly   472 VKYTAPESKCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFMRYHKVHLT 536
                   :...|:||.|||.:|:....|::|:.|..:..|..|:.:|.|:::||:|..:::....
plant   387 -------ASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVNLLVYISDKDLFAEFYRKKQA 444

  Fly   537 RRLILGTSADSEKEEDIVEWLREVGMPADYVNRLARMFQDIKVSEDLNTQFRTSISRHDA----- 596
            |||:...|.          .::||              .||.::.:|.|.|...:|.:..     
plant   445 RRLLFDRSG----------IMKEV--------------TDITLARELQTNFVDYLSANMTTKLGI 485

  Fly   597 -INIKILNAGAWARCSERVSVSLPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGTITFVNNFG 660
             ..:.:|..|.|. ..:...::||.|:.:.:...:.||..|.:.|:|.|.:  |.||...:..|.
plant   486 DFTVTVLTTGFWP-SYKTTDLNLPTEMVNCVEAFKVFYGTKTNSRRLSWIY--SLGTCHILGKFE 547

  Fly   661 R--YDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPELRRTLWSLVAFPKIKKQILLMEP 723
            :  .:|.|:|:|.|||..:|..  :::||..:.....|...:|.|.|.||..   :|.:||:.||
plant   548 KKTMELVVSTYQAAVLLLFNNA--ERLSYTEISEQLNLSHEDLVRLLHSLSC---LKYKILIKEP 607

  Fly   724 AAISSPKDFAENTMFYINQEFAIVKNGKSQRRGKLNLIGRLQLSTERSQQEDNQSIVQLRILRTQ 788
            .:    :..::...|..|.:|.          .|:..| |:.|.....:::..:.:.:.|.....
plant   608 MS----RTISKTDTFEFNSK
FT----------DKMRKI-RVPLPPMDERKKVVEDVDKDRRYAID 657

  Fly   789 EAIIKIMKVRKRMNNAALQGELIDILKNMFLPSKKMIKEQLEWLIENKYMRRDDDDINMFIYVA 852
            .|:::|||.||.:.:..|..|.::.|..||.|..||||:::|.||...|:.||.::.|.|.|||
plant   658 AALVRIMKSRKVLAHQQLVSECVEHLSKMFKPDIKMIKKRIEDLINRDYLERDTENANTFKYVA 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul5NP_651665.2 Cullin 33..743 CDD:279260 136/538 (25%)
CULLIN 520..655 CDD:214545 31/140 (22%)
Cullin_Nedd8 779..846 CDD:214883 23/66 (35%)
AT1G43140NP_175007.2 Cullin 48..623 CDD:279260 136/538 (25%)
CULLIN 428..546 CDD:214545 31/144 (22%)
Cullin_Nedd8 653..713 CDD:287520 22/59 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1040292at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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