DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul5 and Cul2

DIOPT Version :9

Sequence 1:NP_651665.2 Gene:Cul5 / 43434 FlyBaseID:FBgn0039632 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_610117.1 Gene:Cul2 / 35420 FlyBaseID:FBgn0032956 Length:753 Species:Drosophila melanogaster


Alignment Length:866 Identity:215/866 - (24%)
Similarity:376/866 - (43%) Gaps:148/866 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FEEVWPDKRRIVLKLLRQDTVSQREWQDLFFGVHFVCL-WDEKGAAKIY----DCLQQDIVEFI- 71
            |.:|||..|.|...::....|.:..|...|..|:.:|: ..|..|.::|    ..|:|.:.|.: 
  Fly    10 FVDVWPRLRCIAESVITLTKVERSVWNTSFSDVYTLCVAQPEPMADRLYGETKHFLEQHVQEMLA 74

  Fly    72 --VQAQSQVQAQRGEQALLATYIVEWRKFFTQSNYLPLPFRQLEQSPQVKPSSSGSSSSASVSAS 134
              |..:.:.....|...||..|.:.|.::.....||...:..|.|....|...:           
  Fly    75 KKVLIEGECSHSNGGPDLLQRYYITWMEYSQGIKYLHQLYIYLNQQHIKKQKIT----------- 128

  Fly   135 GASTSAAAAAAATSCSGQAGKSGASTSAAAGASTSAAAAAASTSASTSSAAAAAAASGSGSSSSS 199
                                    .|.:..|..:|.||                           
  Fly   129 ------------------------DTESFYGNLSSDAA--------------------------- 142

  Fly   200 TSTSKKNPTEDSPVRKLMLDSWNKHIFHDIKHRLQESAMKIVHAER--NG--DAYDAQLVVGVRE 260
                     |...:.:|.||.|..::...:...|....::.:.|:|  ||  |.:..|::.||..
  Fly   143 ---------EQMEIGELGLDIWRLYMIEYLSSELVRHILEGIAADRASNGTLDHHRVQIINGVIH 198

  Fly   261 SYVNLSS-NAEDKLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAK 324
            |:|.:.. .....|::|:|.||...|:|:..:|..::.:......|..||:.....|..|..||:
  Fly   199 SFVEVQDYKKTGSLKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEVIRILEYESRRAQ 263

  Fly   325 RYLEPSSFSILTYTLVNVLIVDHLNSIIAECPALIRDYETERLNLMFRLMDRVMHGVGVEPMMGD 389
            ::|..||...|........|.|.|..|.:||..::.:...:.|..|:         |.::|:..:
  Fly   264 KFLHVSSLPKLRKECEEKFINDRLGFIYSECREMVSEERRQDLRNMY---------VVLKPIPDN 319

  Fly   390 LQRHIMSAGLADMLSASEVITQDSEK-------YVERLLELFNKFSDLVRNAFNDDPRFLTARDI 447
            |:..:::..| |.:.:..:.|..:.|       :||.:|::.:|:.:|:.:.|.:|..||:|.|.
  Fly   320 LKSELITTFL-DHIKSEGLQTVSALKGENIHIAFVENMLKVHHKYQELIADVFENDSLFLSALDK 383

  Fly   448 AFKTVVNDTSVFKMELPTSIANRGVKYTAPESKCPELLANYCDMLLRRTPLSKRLTSEQIDARLR 512
            |..:|:|       ..||.         ....:..|.:|.|||.||::   ||...:| ||.:|.
  Fly   384 ACASVIN-------RRPTE---------RQPCRSAEYVAKYCDTLLKK---SKTCEAE-IDQKLT 428

  Fly   513 DVLLVLKYVNNKDVFMRYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMPADYVNRLARMFQDI 577
            :.:.:.||:.:|||:.:::...|.:|||...|...:.||.::..|:: ....::.|:|.|||.||
  Fly   429 NNITIFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINRLKQ-ACGYEFTNKLHRMFTDI 492

  Fly   578 KVSEDLNTQFRTSISRHD---AIN--IKILNAGAWARCSERV-SVSLPIELEDYIPDVEEFYKKK 636
            .||.|||.:|.|.:...:   .||  ||:|.||||...|.:| ..::|.|.|..|...|::|.|.
  Fly   493 SVSVDLNNKFNTHLKDSNVDLGINLAIKVLQAGAWPLGSTQVIPFAVPQEFEKSIKMFEDYYHKL 557

  Fly   637 HSGRKLQWYHHMSNGTITFVNNFGRYDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPEL 701
            .|||||.|.|||.:|.:...:....|.:.:.|:|||::..:  ...|.:|...::...:|.|...
  Fly   558 FSGRKLTWLHHMCHGELKLSHLKKSYIVTMQTYQMAIILLF--ETCDSLSCREIQNTLQLNDETF 620

  Fly   702 RRTLWSLVAFPKIKKQILLMEPAAISSPKDFAENTMFYINQEFAIVKNGKSQRRGKLNLIGRLQL 766
            ::.:.     |.|:.::|      .:|.::.|..|...:|.::       :.:|.|..:...||.
  Fly   621 QKHMQ-----PIIESKLL------NASSENLAGETRIELNLDY-------TNKRTKFKISSALQK 667

  Fly   767 STERSQQEDNQSIVQLRILRTQEAIIKIMKVRKRMNNAALQGELIDILKNMFLPSKKMIKEQLEW 831
            .|.:..:....|:.:.|.|..|.||::|||.||.:.:.||..|::.:.|..|.|:..|||:.:|.
  Fly   668 ETPQEVEHTINSVDEDRKLFLQAAIVRIMKARKVLKHNALIQEVLSLSKVSFTPNIAMIKKCVES 732

  Fly   832 LIENKYMRRDDDDINMFIYVA 852
            ||:.:|:.|..:..:.:.|:|
  Fly   733 LIDKQYIERTANSGDEYSYMA 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul5NP_651665.2 Cullin 33..743 CDD:279260 177/735 (24%)
CULLIN 520..655 CDD:214545 54/140 (39%)
Cullin_Nedd8 779..846 CDD:214883 24/66 (36%)
Cul2NP_610117.1 Cullin 39..639 CDD:279260 172/714 (24%)
CULLIN 436..575 CDD:214545 54/139 (39%)
Cullin_Nedd8 680..745 CDD:214883 24/64 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467944
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5647
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1040292at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11932
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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