DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul5 and Cul1

DIOPT Version :9

Sequence 1:NP_651665.2 Gene:Cul5 / 43434 FlyBaseID:FBgn0039632 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001342479.1 Gene:Cul1 / 26965 MGIID:1349658 Length:776 Species:Mus musculus


Alignment Length:657 Identity:206/657 - (31%)
Similarity:350/657 - (53%) Gaps:56/657 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 VRKLMLDSWNKHIFHDIKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNLSSNAED------ 271
            :..|.|.:|...:|..:..::..:.:|::..||||:..:.:|:.||.:|||.|..|.:|      
Mouse   159 IYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGP 223

  Fly   272 KLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSSFSILT 336
            .|.:|:|:||..:|..|..||..:|.|..|:|.|..|||.|:::|.||:.|.:.||..|:...|.
Mouse   224 TLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELA 288

  Fly   337 YTLVNVLIVDHLNSIIAECPALIRDYETERLNLMFRLMDRVMHGVGVEPMMGDLQRHIMSAGLAD 401
            .....|||..||.....|...|:...:.|.|..|:.|:.|:..|:|....:  |:.||.:.|||.
Mouse   289 RKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKL--LETHIHNQGLAA 351

  Fly   402 MLSASEVITQDSEKYVERLLELFNKFSDLVRNAFNDDPRFLTARDIAFKTVVNDTSVFKMELPTS 466
            :....|....|.:.||:.:|::..|::.||.:|||:|..|:.|.|.|....:|:.:|.||     
Mouse   352 IEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKM----- 411

  Fly   467 IANRGVKYTAPESKCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFMRYH 531
                    ....||.|||||.|||.||:::  ||.....:::..|..|::|.||:.:||||.:::
Mouse   412 --------AQSSSKSPELLARYCDSLLKKS--SKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFY 466

  Fly   532 KVHLTRRLILGTSADSEKEEDIVEWLREV-GMPADYVNRLARMFQDIKVSEDLNTQFRTSISRHD 595
            ...|.:||:...||..:.|..::..|::. |.  :|.::|.||||||.||:|||.||:..::..:
Mouse   467 AKMLAKRLVHQNSASDDAEASMISKLKQACGF--EYTSKLQRMFQDIGVSKDLNEQFKKHLTNSE 529

  Fly   596 AI----NIKILNAGAWARCSERVSVSLPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGTITFV 656
            .:    :|::|::|:|. ..:..:.:||.|||........||..:||||||.|.:.:|.|.:. .
Mouse   530 PLDLDFSIQVLSSGSWP-FQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELV-T 592

  Fly   657 NNF-GRYDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPELRRTLWSLVAFPKIKKQILL 720
            |.| .||.|..:|||||:|..:|  ..|..:.:.|..:|::....|.:.|..|     :|.::|:
Mouse   593 NCFKNRYTLQASTFQMAILLQYN--TEDAYTVQQLTDSTQIKMDILAQVLQIL-----LKSKLLV 650

  Fly   721 MEPA-AISSPKDFAENTM--FYINQEFAIVKNGKSQRRGKLNLIGRLQLSTERSQQED--NQSIV 780
            :|.. |.....:...:|:  .|:         |...::.::|:  .:.:.||:.|:::  :::|.
Mouse   651 LEDENANVDE
VELKPDTLIKLYL---------GYKNKKLRVNI--NVPMKTEQKQEQETTHKNIE 704

  Fly   781 QLRILRTQEAIIKIMKVRKRMNNAALQGELIDILKNMFLPSKKMIKEQLEWLIENKYMRRDDDDI 845
            :.|.|..|.||::|||:||.:.:..|.||::..|.:.|.|...:||:.::.|||.:|:.|.|.:.
Mouse   705 EDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEK 769

  Fly   846 NMFIYVA 852
            :.:.|:|
Mouse   770 DTYSYLA 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul5NP_651665.2 Cullin 33..743 CDD:279260 174/544 (32%)
CULLIN 520..655 CDD:214545 48/139 (35%)
Cullin_Nedd8 779..846 CDD:214883 25/66 (38%)
Cul1NP_001342479.1 Cullin 21..660 CDD:395716 172/528 (33%)
Cullin_Nedd8 706..767 CDD:402267 23/60 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1040292at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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