DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul5 and cul-5

DIOPT Version :9

Sequence 1:NP_651665.2 Gene:Cul5 / 43434 FlyBaseID:FBgn0039632 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_505616.2 Gene:cul-5 / 179413 WormBaseID:WBGene00000840 Length:765 Species:Caenorhabditis elegans


Alignment Length:857 Identity:383/857 - (44%)
Similarity:541/857 - (63%) Gaps:111/857 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FEEVWPDKRRIVLKLLRQDTVSQREWQDLFFGVHFVCLWDEKGAAKIYDCLQQDIVEFIVQAQSQ 77
            |:|.|.....||..||.|.:|:...|||||:.|:.:..|.:.|..||.|.|.:.|.:::.:|..:
 Worm     3 FDEEWSKADPIVHALLHQKSVTPAAWQDLFYHVYKITSWVDDGPLKIRDILTRCINDYVHEANKR 67

  Fly    78 VQAQRGEQALLATYIVEWRKFFTQSNYLPLPFRQLEQSPQVKPSSSGSSSSASVSASGASTSAAA 142
            :::.:.:.:||..||.||.:|:.|:|.|||||:::::|                           
 Worm    68 IRSLQTDGSLLIGYIKEWNRFYQQANILPLPFKKIDES--------------------------- 105

  Fly   143 AAAATSCSGQAGKSGASTSAAAGASTSAAAAAASTSASTSSAAAAAAASGSGSSSSSTSTSKKNP 207
                                                                        |::..
 Worm   106 ------------------------------------------------------------SRRRS 110

  Fly   208 TEDSP---VRKLMLDSWNKHIFHDIKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNLSSNA 269
            ..::|   :|.:||:.||:.||.:|..:|...|:::|..||:|:..|||.|:|:|||:|.|:..|
 Worm   111 VPETPEESIRTVMLEKWNEIIFMNISEQLLVEALRLVKEERDGNIIDAQNVIGIRESFVALNDRA 175

  Fly   270 -EDKLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLE---PS 330
             ||.|.:||::||..:::.|.|:|:........|.|||.||.|||.||.||:.|||||||   |:
 Worm   176 GEDPLLVYRQSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSPT 240

  Fly   331 SFSILTYTLVNVLIVDHLNSIIAECPALIRDYETERLNLMFRLMDRVMHGVGVEPMMGDLQRHIM 395
            |...:...:: .|:....::|:|||..||...:.|||..::||:.|...  |::.::..:..||.
 Worm   241 SGKHMEKAVI-ALVESFEDTILAECSKLIASKDVERLQRLYRLIRRTRS--GIDTVLKCIDTHIR 302

  Fly   396 SAGLADMLSASEVITQDSEKYVERLLELFNKFSDLVRNAFNDDPRFLTARDIAFKTVVNDTSVFK 460
            :.||.||.:.:|.::.|.|:||::||.:|:|||.|||..|.||.|.|||||.||:.||||:|:||
 Worm   303 TEGLNDMRNNAENLSTDPERYVQQLLLMFDKFSSLVREGFCDDARLLTARDKAFRAVVNDSSIFK 367

  Fly   461 MELPTSIANRGVKYTAPESKCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKD 525
                |.:.|:..:..:.||||.||||||||:|||:|.|||:||||:||.:|..||||||||.|||
 Worm   368 ----TEMMNKKGRTLSVESKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKD 428

  Fly   526 VFMRYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMPADYVNRLARMFQDIKVSEDLNTQFRTS 590
            ||||:|:.||:|||||..|||.||||.:|..|||.|||:|.||:|:||.|||::::|:|:.|:.:
 Worm   429 VFMRFHRAHLSRRLILEMSADQEKEEMMVTKLRECGMPSDAVNKLSRMLQDIELNKDMNSSFKKA 493

  Fly   591 I-------SRHDAINIKILNAGAWAR-CSERVSVSLPIELEDYIPDVEEFYKKKHSGRKLQWYHH 647
            :       |..|:||:|:||.|||.| .|||:..|||.||||::|::|.||||:|:||||.|.||
 Worm   494 LTGTNNNKSIADSINMKVLNGGAWGRGGSERIRFSLPRELEDFVPEMEAFYKKQHNGRKLCWMHH 558

  Fly   648 MSNGTITF-VNNFGRYDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPELRRTLWSLVAF 711
            .|:||:.| ..|.||:||:.|||||||||.:|.|.|||||.|.|||||||||.||.|||.||||:
 Worm   559 WSSGTMVFGTANGGRFDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSLVAY 623

  Fly   712 PKIKKQILLME-PAAISSPKDFAENTMFYINQEFAIVKNGKSQRRGKLNLIGRLQLSTERSQQED 775
            ||::.||||.: |:...:.:||.::|.|.||.:|.:|||||||:|||:|||||||||.|.:.:::
 Worm   624 PKMRYQILLCDVPSTTVTARDFTDSTKFLINHDFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKE 688

  Fly   776 NQSIVQLRILRTQEAIIKIMKVRKRMNNAALQGELIDILKNMFLPSKKMIKEQLEWLIENKYMRR 840
            ::|||.||.||.||.|:||:|.||....|.|..||::|||.:|:|::|:||||::||||||||.|
 Worm   689 HESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMER 753

  Fly   841 DDDDINMFIYVA 852
            ..||||.|:|::
 Worm   754 RADDINTFVYIS 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul5NP_651665.2 Cullin 33..743 CDD:279260 310/726 (43%)
CULLIN 520..655 CDD:214545 81/142 (57%)
Cullin_Nedd8 779..846 CDD:214883 39/66 (59%)
cul-5NP_505616.2 Cullin 18..656 CDD:279260 312/731 (43%)
CULLIN 423..562 CDD:214545 79/138 (57%)
Cullin_Nedd8 692..759 CDD:214883 39/66 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163388
Domainoid 1 1.000 596 1.000 Domainoid score I98
eggNOG 1 0.900 - - E1_COG5647
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2597
Inparanoid 1 1.050 731 1.000 Inparanoid score I314
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49236
OrthoDB 1 1.010 - - D1040292at2759
OrthoFinder 1 1.000 - - FOG0005530
OrthoInspector 1 1.000 - - oto18362
orthoMCL 1 0.900 - - OOG6_107737
Panther 1 1.100 - - LDO PTHR11932
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2468
SonicParanoid 1 1.000 - - X3952
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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