DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul5 and cul-2

DIOPT Version :9

Sequence 1:NP_651665.2 Gene:Cul5 / 43434 FlyBaseID:FBgn0039632 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001023008.1 Gene:cul-2 / 176806 WormBaseID:WBGene00000837 Length:791 Species:Caenorhabditis elegans


Alignment Length:892 Identity:200/892 - (22%)
Similarity:363/892 - (40%) Gaps:180/892 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FEEVWPDKRRIVLKLLRQDTVSQREWQDLFFGVHFVCL-----WDEKGAAKIYDCLQ-------Q 65
            |::||...|..::.::....::..:|...|..|:.:|:     ..|:...::..|:|       |
 Worm    28 FDKVWVQLRPSIIDIINLRPITNVQWHHKFSDVYDICVSIPTPLSERLYNEVKACIQEHVRQKRQ 92

  Fly    66 DIVEFIVQAQSQVQAQRGEQALLATYIVEWRKFFTQSNYLPLPFRQLEQSPQVKPSSSGSSSSAS 130
            |||:.            ....||..|...||.|...:.::...|                     
 Worm    93 DIVDV------------DPDLLLQEYHKMWRVFHEGAIFIHRLF--------------------- 124

  Fly   131 VSASGASTSAAAAAAATSCSGQAGKSGASTSAAAGASTSAAAAAASTSASTSSAAAAAAASGSGS 195
                                |...|..............|..||............         
 Worm   125 --------------------GYLNKQFVKQKRCTDLDNFAQYAAFLQIPDVKEIGC--------- 160

  Fly   196 SSSSTSTSKKNPTEDSPVRKLMLDSWNKHIFHDIKHRLQESAMKIVHAERNGD-AYDAQLVVGVR 259
                                |.|:.|.:.:...|..:|.:..:..:..:|.|: .:.|..|.||.
 Worm   161 --------------------LALEIWKEDLVKTILPQLVKLLLIAIDNDRKGNFPHIANEVSGVI 205

  Fly   260 ESYVNLSSN--------------AEDKLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMK 310
            .|:|.:...              .|.....|:|:||...|..|.::|...:.:...:.....||:
 Worm   206 NSFVKMEETDFDVVPAEGARYKARESTTAFYQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYME 270

  Fly   311 YADSKLREEEVRAKRYLEPSSFSILTYTLVNVLIVDHLNSIIAECPALIRDYETERLNLMFRLMD 375
            .....|.:||:|||:||..||...:......|:|..|.:.:.|.|..||.:.|.:.|..|:||:.
 Worm   271 QVIVLLEQEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKLHAVCHDLITNEENKDLRNMYRLLK 335

  Fly   376 RVMHGVGVEPMMGDLQRHIMSAGL--ADMLSASEVITQDSEKYVERLLELFNKFSDLVRNAFNDD 438
            .:..|:.|  |:.:.:.::...||  ...|:...|    .:::||.:|.::|||:|:....|.||
 Worm   336 PIQAGLSV--MVKEFEEYVKKKGLEAVSRLTGENV----PQQFVENVLRVYNKFNDMKTAVFMDD 394

  Fly   439 PRFLTARDIAFKTVVNDTSVFKMELPTSIANRGVKYTAPESKCPELLANYCDMLLRRTPLSKRLT 503
            ..|.:..|.|.:.|||     ..|...|:           .|..|.||.|.|.||:::  :|.|:
 Worm   395 GEFSSGLDKALQGVVN-----SKEPGQSV-----------PKASERLARYTDGLLKKS--TKGLS 441

  Fly   504 SEQIDARLRDVLLVLKYVNNKDVFMRYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMPADYVN 568
            ...::|:|...:::.:|:.:||:|.:::...|..|||..||...:.||.::..|:: ....::.:
 Worm   442 ETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQ-ACGYEFTS 505

  Fly   569 RLARMFQDIKVSEDLNTQFRTSISRHDAI--NIK-------ILNAGAWARCSERVSVS------- 617
            :|:|||.||.:|::|:..|...|:....:  ::|       ||.||:|...:.::|.:       
 Worm   506 KLSRMFTDIGLSQELSNNFDKHIADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQ 570

  Fly   618 ------LPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGTITFVNNFGRYDLDVTTFQMAVLFA 676
                  ||..|:..|.:.|:||..||:||||.|..:||.|.:.......:|...:..:|||.|..
 Worm   571 DVANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLC 635

  Fly   677 WNQRQHDKISYENLRLATELPDPELRRTLWSLVAFPKIKKQILLMEPAAISSPKDFAENTMFYIN 741
            :.:|  |.|..:::.....:....|.:|:.:::       .:.|:    ....::...:::..:|
 Worm   636 FERR--DAILVKDIGEEIGVSGDYLLKTIRTIL-------DVTLL----TCDDQNLTADSLVRLN 687

  Fly   742 QEFAIVKNGKSQRRGKLNL-IGRLQLSTERSQQEDNQSIVQLRILRTQEAIIKIMKVRKRMNNAA 805
            ...       :.:|.|..| ..::..:.|:.|:....::.|.|....:.||::|||.||.:.:.|
 Worm   688 MSM-------TSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNA 745

  Fly   806 LQGELIDILKNMFLPSKKMIKEQLEWLIENKYMRRDDDDINMFIYVA 852
            |..|::|..|..|.|....||:.:|.|||..|::|.|.: :.:.|:|
 Worm   746 LVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQN-DEYQYLA 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul5NP_651665.2 Cullin 33..743 CDD:279260 164/760 (22%)
CULLIN 520..655 CDD:214545 47/156 (30%)
Cullin_Nedd8 779..846 CDD:214883 25/66 (38%)
cul-2NP_001023008.1 Cullin 32..662 CDD:366357 163/738 (22%)
Cullin_Nedd8 719..784 CDD:214883 25/64 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1040292at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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