DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul5 and cul2

DIOPT Version :9

Sequence 1:NP_651665.2 Gene:Cul5 / 43434 FlyBaseID:FBgn0039632 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_002935209.2 Gene:cul2 / 100492608 XenbaseID:XB-GENE-960931 Length:766 Species:Xenopus tropicalis


Alignment Length:875 Identity:229/875 - (26%)
Similarity:391/875 - (44%) Gaps:153/875 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FEEVWPDKRRIVLKLLRQDTVSQREWQDLFFGVHFVCL-WDEKGAAKIYDCLQQDIVEFIVQAQS 76
            |:|.|......:..::..|.|.:..|.|.|..::.:|: :.|....::|...:..:...:.|..:
 Frog    10 FDETWNKLLTTIKAVVMLDYVERATWNDRFSDIYALCVAYPEPLGERLYTETKIFLENHVQQLHT 74

  Fly    77 QVQAQRGEQALLATYIVEWRKFFTQSNYLPLPFRQLEQSPQVKPSSSGSSSSASVSASGASTSAA 141
            :| ....|| :|..|...|.::...::|:...:|.|                        :|...
 Frog    75 RV-LDSAEQ-VLVMYYRYWEEYSRGADYMDCLYRYL------------------------NTQYI 113

  Fly   142 AAAAATSCSGQAGKSGASTSAAAGASTSAAAAAASTSASTSSAAAAAAASGSGSSSSSTSTSKKN 206
            .....|....|.|..|...:                                            .
 Frog   114 KKNKLTEADLQYGYGGVDMN--------------------------------------------E 134

  Fly   207 PTEDSPVRKLMLDSWNKHIFHDIKHRLQESAMKIVHAERNGDAYDAQLVVGVRESYVNLSS-NAE 270
            |..:  :.:|.||.|.|.:...::..|....:|.:..:|.|:..:.:::.||..|:|::.. ..:
 Frog   135 PLME--IGELALDLWRKLMIEPLQDTLLRMLLKEIKRDRCGEDPNQKVIHGVINSFVHVEQYKKK 197

  Fly   271 DKLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSSFSIL 335
            ..|:.|:|.||:.:|..|.|:|:.:::...||:....||:....:|::||:|.::||.|||::.:
 Frog   198 FPLKFYQEIFELPFLAETGEYYKQEASNLLQESNCSQYMEKILGRLKDEEIRCRKYLHPSSYNKV 262

  Fly   336 TYTLVNVLIVDHLNSIIAECPALIRDYETERLNLMFRLMDRVMHGVGVEPMMGDLQRHIMSAGLA 400
            .:.....::.|||..:.|||..:||......:..|:.|:..|.:  |:..|:.:||.||...||.
 Frog   263 IHECQQRMVADHLQFLHAECHNIIRQERRSDMANMYTLLRAVSN--GLPHMIQELQNHIHDEGLR 325

  Fly   401 DM--LSASEVITQDSEKYVERLLELFNKFSDLVRNAFNDDPRFLTARDIAFKTVVNDTSVFKMEL 463
            .:  ||...:.||    :||.:||:.:||..||.:..|.|..|::|.|.|...|||         
 Frog   326 AISNLSQENMPTQ----FVESVLEVHSKFVQLVNSVLNGDQHFMSALDKALTCVVN--------- 377

  Fly   464 PTSIANRGVKYTAPESKC--PELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDV 526
                      |..|:|.|  |||||.|||.:|:::  :|.:|..:::.:|...:.|.||:::|||
 Frog   378 ----------YREPKSVCKAPELLAKYCDNMLKKS--AKGMTENEVEDKLTSFITVFKYIDDKDV 430

  Fly   527 FMRYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMPADYVNRLARMFQDIKVSEDLNTQFRTSI 591
            |.:::...|.:|||.|.|...:.||.::..|:: ....::.::|.||:.|:.||.|||.:|...|
 Frog   431 FQKFYARMLAKRLIHGLSMSMDSEETMINKLKQ-ACGYEFTSKLHRMYTDMSVSADLNNKFNNFI 494

  Fly   592 SRHDAI-------NIKILNAGAWARCSERVSV-SLPIELEDYIPDVEEFYKKKHSGRKLQWYHHM 648
            ...|.:       .|.:|.||||.......|. ::|.|||..:...|.||.:..|||||.|.|::
 Frog   495 KNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYNQHFSGRKLTWLHYL 559

  Fly   649 SNGTITFVNNFGRYDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPELRRTLWSLVAFPK 713
            ..|.:........|...|||:|||||.|:|  ..:.::|:.|:.:|::.:.||.:|:.||:....
 Frog   560 CTGEVKMNYLCKPYVAMVTTYQMAVLLAFN--NSEIVTYKELQDSTQMNEKELTKTIKSLLDVKM 622

  Fly   714 IKKQILLMEPAAISSPKDFAENTMFYINQEFAIVKNGKSQRRGKLNLIGRLQLSTERSQQ----- 773
            |...         |..:|....:.|.:|..|       |.:|.|..:...:|..|.:..|     
 Frog   623 INHD---------SDKEDIDGESTFSLNMNF-------SSKRTKFKITTPMQKDTPQGAQPTCAE 671

  Fly   774 ---------------EDNQSIV-QLRILRTQEAIIKIMKVRKRMNNAALQGELIDILKNMFLPSK 822
                           |..:|.| :.|.:..|.||::|||.||.:.:.||..|:|...:..|.||.
 Frog   672 EAMLWRGERRFSLEVEQTRSAVDEDRKMYLQAAIVRIMKARKILRHNALIQEVISQSRARFNPSI 736

  Fly   823 KMIKEQLEWLIENKYMRRDDDDINMFIYVA 852
            .|||:.:|.||:.:|:.|.....:.:.|||
 Frog   737 SMIKKCIEVLIDKQYIERSQASADEYSYVA 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul5NP_651665.2 Cullin 33..743 CDD:279260 188/723 (26%)
CULLIN 520..655 CDD:214545 48/142 (34%)
Cullin_Nedd8 779..846 CDD:214883 25/67 (37%)
cul2XP_002935209.2 Cullin 14..644 CDD:395716 190/740 (26%)
Cullin_Nedd8 696..756 CDD:402267 24/59 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1040292at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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