DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11843 and Plg

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_445943.1 Gene:Plg / 85253 RGDID:619893 Length:812 Species:Rattus norvegicus


Alignment Length:257 Identity:88/257 - (34%)
Similarity:118/257 - (45%) Gaps:40/257 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVLTAAHCLE-SERGEVNVVRLGEL 131
            :|||..|.|..:|....|..|    .....||||.|||..:||||||||| |.|.|...|.||..
  Rat   582 VVGGCVANPHSWPWQISLRTR----FSGQHFCGGTLISPEWVLTAAHCLEKSSRPEFYKVILGAH 642

  Fly   132 DFDSLDEDAAPRDYMVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDERSSDSF 196
            :...|..|.  :...|...:..|...      ||.|:||:..........|||||..:...:|..
  Rat   643 EERILGSDV--QQIAVTKLVLEPNDA------DIALLKLSRPATITDNVIPACLPSPNYVVADRT 699

  Fly   197 IA--VGWGST----GLALKPSAQLLKVKLQRYGNWVCKK--LLTRQVEEFPRGFDGNNQLCVGSE 253
            :.  .|||.|    |......|||..::     |.||.:  .|..:|:        :.:||.| .
  Rat   700 LCYITGWGETKGTPGAGRLKEAQLPVIE-----NKVCNRAEYLNNRVK--------STELCAG-H 750

  Fly   254 MAQ--DTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGIPGIYTRVYPYLGWIARTL 313
            :|.  |:|.|||||||:.:.::   .|::.|:||.||.|..|..||:|.||..|:.||.|.:
  Rat   751 LAGGIDSCQGDSGGPLVCFEKD---KYILQGVTSWGLGCARPNKPGVYVRVSRYVNWIEREM 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 87/254 (34%)
PlgNP_445943.1 PAN_AP_HGF 33..97 CDD:238532
KR 101..183 CDD:214527
KR 183..262 CDD:214527
KR 273..354 CDD:214527
KR 374..456 CDD:214527
KR 480..562 CDD:214527
Tryp_SPc 582..807 CDD:238113 87/253 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.