DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and Hgfac

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_445772.1 Gene:Hgfac / 58947 RGDID:70909 Length:653 Species:Rattus norvegicus


Alignment Length:266 Identity:75/266 - (28%)
Similarity:113/266 - (42%) Gaps:52/266 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PLIVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVLTAAHCLESE--RGEVNVVRL 128
            |.|:||..:.|...|.:|.:       ...:.||.|.|:...:|::||||..|.  |..:.|| |
  Rat   404 PRIIGGSSSLPGSHPWLAAI-------YIGNGFCAGSLVHTCWVVSAAHCFSSSPPRDSITVV-L 460

  Fly   129 GELDFDSLDEDAAPRDYMVAGYIAHPGYE--DPQFYHDIGLVKLTE----AVVFDLYKHPACLPF 187
            |:..|:...:  ..:.:.:..|:.:..|.  :|. .||:.|::|.:    ..|...:..|.||| 
  Rat   461 GQHFFNRTTD--VTQTFAIEKYVPYTLYSVFNPN-DHDLVLIRLKKKGERCAVRSQFVQPICLP- 521

  Fly   188 QDERSSDSF-------IAVGWGSTGLALKPSAQLLKVKLQRYGNWVCKKLLTRQVE---EFPRGF 242
               .:..||       || |||.           :...:..|.|.:.:.|:....:   ..|..:
  Rat   522 ---EAGSSFPTGHKCQIA-GWGH-----------MDENVSGYSNSLLEALVPLVADHKCSSPEVY 571

  Fly   243 DGN---NQLCVG-SEMAQDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGIPGIYTRVY 303
            ..:   |.||.| .:...|.|.|||||||:........:|   ||.|.|..||....||:||||.
  Rat   572 GADISPNMLCAGYFDCKSDACQGDSGGPLVCEKNGVAYLY---GIISWGDGCGRLNKPGVYTRVS 633

  Fly   304 PYLGWI 309
            .|:.||
  Rat   634 NYVDWI 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 74/264 (28%)
HgfacNP_445772.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011
FN1 197..237 CDD:238018
EGF 242..274 CDD:394967
Kringle 283..364 CDD:395005
Tryp_SPc 406..641 CDD:238113 74/264 (28%)
Blue background indicates that the domain is not in the aligned region.

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