DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and swift

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001038273.2 Gene:swift / 556598 ZFINID:ZDB-GENE-050208-698 Length:251 Species:Danio rerio


Alignment Length:261 Identity:84/261 - (32%)
Similarity:114/261 - (43%) Gaps:61/261 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IVGGHPAQPREFPHMARLGRRPDPSSRADW-FCGGVLISERFVLTAAHCLESERGEVNVVRLGEL 131
            |..|..|:|...|:|..|..:       .| .|||.||:|:||||||||.  |:|:|..|.:|..
Zfish    26 IEDGTEAKPHSRPYMVSLQIK-------GWHICGGSLITEQFVLTAAHCW--EKGDVITVVVGAH 81

  Fly   132 D------FDSLDEDAAPRDYMVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDE 190
            |      :||.|         |..||.||.|:...:.:||.|:||.:.|..........||.:.|
Zfish    82 DLSGNKTYDSFD---------VTSYIPHPDYKQNSYKNDILLLKLNKKVTLSNNVGLISLPKEGE 137

  Fly   191 R-SSDSFIAV-GWGSTGLALKPSAQLLKVKLQRYGNWVCKKLLTRQVEEFPR----GFDGNNQLC 249
            . .:|:..:| |||.           |.|:..|.|:......:....||..|    .|..:..:|
Zfish   138 NVEADTLCSVAGWGR-----------LWVRGPRPGHLREADTVIMTDEECKRRWEIKFKVSKMIC 191

  Fly   250 V----GSEMAQDTCNGDSGGPLLMYHREYPCMYVVVGITS--AGLSCGSPGIPGIYTRVYPYLGW 308
            |    ||      |:|||||||:       |...|||:||  ....|.|...|.:|.::..|:.|
Zfish   192 VYGHGGS------CSGDSGGPLV-------CGDTVVGVTSFTDRYLCNSRLRPNVYAKISAYIPW 243

  Fly   309 I 309
            |
Zfish   244 I 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 84/261 (32%)
swiftNP_001038273.2 None

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