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Protein Alignment CG11843 and snk

DIOPT Version :9

Sequence 1:	NP_001287578.1	Gene:	CG11843 / 43432	FlyBaseID:	FBgn0039630	Length:	316	Species:	Drosophila melanogaster
Sequence 2:	NP_001097766.1	Gene:	snk / 41607	FlyBaseID:	FBgn0003450	Length:	435	Species:	Drosophila melanogaster

Alignment Length:	301	Identity:	113/301 - (37%)
Similarity:	147/301 - (48%)	Gaps:	28/301 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 CSRYKKSVFEERI------EFGFLLPGASIESRIIDNCRSYT--------PLIVGGHPAQPREFP 80
            |....|.|..:||      |:.    .|:....:.|..|:::        ||||||.|.:...||
  Fly   138 CPLADKHVLAQRISATKCQEYN----AAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFP 198

  Fly    81 HMARLGRRPDPSSR---ADWFCGGVLISERFVLTAAHCLESERGEVNVVRLGELDFDSLDEDAAP 142
            |||.||......|:   ..|.|||.|:||.:|||||||..|.....::||||....:  :..|..
  Fly   199 HMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLN--ETSATQ 261

  Fly   143 RDYMVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDERSSDSFIAVGWGSTGLA 207
            :|..:...:.||.|....:||||.|:|||..|.|.....||||....|....:.:|.|||.|...
  Fly   262 QDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPTVVAAGWGRTEFL 326

  Fly   208 LKPSAQLLKVKLQRYGNWVCKKLLTRQVEEFPRG-FDGNNQLCVG-SEMAQDTCNGDSGGPLLMY 270
            ...|..|.:|.|.......||::. |:....||| .:|  |.|.| ....:|||.||||||:...
  Fly   327 GAKSNALRQVDLDVVPQMTCKQIY-RKERRLPRGIIEG--QFCAGYLPGGRDTCQGDSGGPIHAL 388

  Fly   271 HREYPCMYVVVGITSAGLSCGSPGIPGIYTRVYPYLGWIAR 311
            ..||.|:..||||||.|..|.:|..||:|||:|.||.||.:
  Fly   389 LPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.