DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and CG1299

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster


Alignment Length:264 Identity:88/264 - (33%)
Similarity:131/264 - (49%) Gaps:22/264 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DNCRS---YTPLIVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVLTAAHCLESER 120
            :.|.|   |...||||..::...:|.:|.|| ..|||. :.:.|||.||:.|.|||||||:   |
  Fly   249 EGCGSTVGYFKKIVGGEVSRKGAWPWIALLG-YDDPSG-SPFKCGGTLITARHVLTAAHCI---R 308

  Fly   121 GEVNVVRLGELDFDSLDEDAAPRDYMVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACL 185
            .::..|||||.|. |.|.:....|..:|.|::||.|.......|:.::.|...|.|.....|.||
  Fly   309 QDLQFVRLGEHDL-STDTETGHVDINIARYVSHPDYNRRNGRSDMAILYLERNVEFTSKIAPICL 372

  Fly   186 PFQDERSSDSFI-----AVGWGSTGLALKPSAQLL-KVKLQRYGNWVCKKLLTRQVEEFPRGFDG 244
            |........|::     ..|||.| :....|||:| ::::..|.|.||.:...::...|......
  Fly   373 PHTANLRQKSYVGYMPFVAGWGKT-MEGGESAQVLNELQIPIYDNKVCVQSYAKEKRYFSADQFD 436

  Fly   245 NNQLCVG-SEMAQDTCNGDSGGPLLM---YHREYPCMYVVVGITSAGLSCGSPGIPGIYTRVYPY 305
            ...||.| ....:|||.|||||||::   |..:  ..:.::|:.|.|:.|..|.:||:|:....:
  Fly   437 KAVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQ--LRFYLIGVVSYGIGCARPNVPGVYSSTQYF 499

  Fly   306 LGWI 309
            :.||
  Fly   500 MDWI 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 85/252 (34%)
CG1299NP_647862.1 CLIP 37..92 CDD:463440
CLIP 164..216 CDD:463440
Tryp_SPc 261..503 CDD:238113 83/250 (33%)
Blue background indicates that the domain is not in the aligned region.

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