DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and Tmprss4

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:274 Identity:92/274 - (33%)
Similarity:125/274 - (45%) Gaps:40/274 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LPGASIESRIIDNCRSY-TPLIVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVLT 111
            |.|:.:..|.:|..:|. |..:|||..|....:|....:      .......|||.::...::||
  Rat   225 LSGSLVSLRCLDCGKSLKTTRVVGGVEASADSWPWQVSI------QYNKQHVCGGSILDHHWILT 283

  Fly   112 AAHCLESERGEVNV----VRLGELDFDSLDEDAAPRDYMVAGYIAHPGYEDPQFYHDIGLVKLTE 172
            ||||.   |..::|    ||.|.....:     :|...:...:||.|....|: ..||.||||..
  Rat   284 AAHCF---RKYLDVSSWKVRAGSNKLGN-----SPSLPVAKIFIAEPNPLQPK-EKDIALVKLKM 339

  Fly   173 AVVFDLYKHPACLPFQDERSSDSF--IAVGWGST----GLALKPSAQLLKVKLQRYGNWVCKKLL 231
            .:.|.....|.||||.||....:.  ..:|||.|    |   |.|..||:..:|...:..|    
  Rat   340 PLTFSGSVRPICLPFSDEELIPTMPVWVIGWGFTEENGG---KMSDTLLQASVQVIDSARC---- 397

  Fly   232 TRQVEEFPRGFDGNNQLCVGS-EMAQDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGI 295
              ..|:..:|......||.|: :..:|||.|||||| ||||.:   .:.||||.|.|..||||..
  Rat   398 --NAEDAYQGEVTAGMLCAGTPQGGKDTCQGDSGGP-LMYHYD---KWQVVGIVSWGYGCGSPST 456

  Fly   296 PGIYTRVYPYLGWI 309
            ||:||:|..||.||
  Rat   457 PGVYTKVTAYLDWI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 86/253 (34%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597 4/12 (33%)
Tryp_SPc 245..470 CDD:214473 84/252 (33%)
Blue background indicates that the domain is not in the aligned region.

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