DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and l(2)k05911

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:282 Identity:86/282 - (30%)
Similarity:125/282 - (44%) Gaps:59/282 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 CRSYTPL------IVGGHPAQPREFPHMARL---GRRPDPSSRADWFCGGVLISERFVLTAAHC- 115
            |.:..|:      ||||..|.|.|||.:|.|   |::         ||||.||:...:|||||| 
  Fly   387 CGNKNPVTPDQERIVGGINASPHEFPWIAVLFKSGKQ---------FCGGSLITNSHILTAAHCV 442

  Fly   116 ----------LESERGEVNVVRLGELDFDSLDEDAAPRDYMVAGYIAHPGYEDPQFYHDIGLVKL 170
                      |.:..|:.|:         ..|.:.......:...:.|.|:|....::|:.::.|
  Fly   443 ARMTSWDVAALTAHLGDYNI---------GTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTL 498

  Fly   171 TEAVVFDLYKHPACLPFQDERSSDSF-----IAVGWGS---TGLALKPSAQLL-KVKLQRYGNWV 226
            :|.|.|.....|.|||....:.|.|:     ...||||   .|    |...:| ||.:..:.|..
  Fly   499 SEPVPFTREIQPICLPTSPSQQSRSYSGQVATVAGWGSLRENG----PQPSILQKVDIPIWTNAE 559

  Fly   227 CKKLLTRQVEEFPRGFDGNNQLCVGSEMAQDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCG 291
            |.:...|..   |.|.. .:.:|.| :.|:|:|:||||||:::....   .|..|||.|.|:.||
  Fly   560 CARKYGRAA---PGGII-ESMICAG-QAAKDSCSGDSGGPMVINDGG---RYTQVGIVSWGIGCG 616

  Fly   292 SPGIPGIYTRVYPYLGWIARTL 313
            ....||:||||...|.||.:.:
  Fly   617 KGQYPGVYTRVTSLLPWIYKNI 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 84/266 (32%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 84/266 (32%)
Blue background indicates that the domain is not in the aligned region.

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