DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and F12

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:260 Identity:79/260 - (30%)
Similarity:105/260 - (40%) Gaps:42/260 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVLTAAHCLESERG--EVNVVRLGE 130
            :|||..|.|...|::|.|       ...|.||.|.||...:||||||||:....  |:.|| ||:
  Rat   362 VVGGLVALPGSHPYIAAL-------YWGDSFCAGSLIDPCWVLTAAHCLQKRPAPEELTVV-LGQ 418

  Fly   131 LDFDSLDEDAAPRDYMVAGYIAHPGYEDPQFYHDIGLVKL----TEAVVFDLYKHPACLPFQDER 191
            ...:...|..  :...|..|..|.|:....:.||:.|::|    ....:...:..|.|||.....
  Rat   419 DRHNQSCERC--QTLAVHSYRLHEGFSSKTYQHDLALLRLRGRKNSCAILSPHVQPVCLPSSAAP 481

  Fly   192 SSDSFI--AVGWG---------STGLALKPSAQLLKVKLQRYGNWVCKKLLTRQVEEFPRGFDGN 245
            .|::.:  ..|||         :|.|   ..||:..:.|.|     |...........|      
  Rat   482 PSETVLCEVAGWGHQFEGAEEYATFL---QEAQVPFISLDR-----CSSSNVHGDAILP------ 532

  Fly   246 NQLCVG-SEMAQDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGIPGIYTRVYPYLGWI 309
            ..||.| .|...|.|.|||||||:...........:.|:.|.|..||....||:||.|..||.||
  Rat   533 GMLCAGFLEGGADACQGDSGGPLVCDEGVTERQLTLRGVISWGSGCGDRNKPGVYTDVANYLDWI 597

  Fly   310  309
              Rat   598  597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 79/260 (30%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 79/260 (30%)
Blue background indicates that the domain is not in the aligned region.

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