DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and Tpsg1

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001426649.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:320 Species:Rattus norvegicus


Alignment Length:296 Identity:96/296 - (32%)
Similarity:123/296 - (41%) Gaps:64/296 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GFLL----PGASIESRIIDNCR----SYT-PLIVGGHPAQPREFPHMARLGRRPDPSSRADWFCG 100
            ||||    ||.|.|: :...|.    |:. ..|||||.||...:|..|.|      ..:....||
  Rat     8 GFLLLLAVPGISCEA-LQSGCGQPQVSHAGSRIVGGHAAQAGAWPWQASL------RLQKVHVCG 65

  Fly   101 GVLISERFVLTAAHCLESERGEVN----VVRLGELDFDSLDEDAAPRDYMVAGYIAHPGYEDPQF 161
            |.|:|..:|||||||..   |.||    .|.||||........:..:..::  |.:.||  .|..
  Rat    66 GSLLSPEWVLTAAHCFS---GSVNSSDYEVHLGELTITLSPHFSTVKQIIM--YSSAPG--PPGS 123

  Fly   162 YHDIGLVKLTEAVVFDLYKHPACLPFQDERSSD-----SFIAVGWGST--GLALKPSAQLLKVKL 219
            ..||.||:|...|.......|.|||   |.|:|     .....|||.|  |..|||...|.:.|:
  Rat   124 SGDIALVQLATPVALSSQVQPVCLP---EASADFHPGMQCWVTGWGYTQEGEPLKPPYNLQEAKV 185

  Fly   220 QRYGNWVCKKLLTRQVEEFPRGFDGNNQLCVGSEM-----AQDTCNGDSGGPLLMYHREYPC--- 276
            .           ...||...:.:..:|...:.|:|     ..|.|..||||||:       |   
  Rat   186 S-----------VVDVETCSQAYSSSNGSLIQSDMLCAWGPGDACQDDSGGPLV-------CRVA 232

  Fly   277 -MYVVVGITSAGLSCGSPGIPGIYTRVYPYLGWIAR 311
             ::...|:.|.|..||.|..||:|.||..|:.||.|
  Rat   233 GIWQQAGVVSWGEGCGRPDRPGVYARVTAYVNWIHR 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 86/264 (33%)
Tpsg1NP_001426649.1 None

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