DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and Prss42

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001100333.2 Gene:Prss42 / 301027 RGDID:1562548 Length:340 Species:Rattus norvegicus


Alignment Length:256 Identity:80/256 - (31%)
Similarity:119/256 - (46%) Gaps:32/256 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PL--IVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVLTAAHCLESERGEVNVVRL 128
            ||  |:||..|:..::|....|      ..|....|||.|::.::|||||||:.| |.:.| |::
  Rat    80 PLMKIMGGVDAEEGKWPWQVSL------RVRHMHVCGGSLLNSQWVLTAAHCIHS-RVQYN-VKM 136

  Fly   129 GELDFDSLDEDAAPRDYMVAGYIAHPGYEDPQ-FYHDIGLVKLTEAVVFDLYKHPACLP---FQD 189
            |:   .|:..........:.....||.:.... ..:||.|:||.:.|.|....||.|:|   |..
  Rat   137 GD---RSVYRQNTSLVIPIQNIFVHPKFSTTTVVQNDIALLKLQQPVNFTSSIHPICVPTGTFHV 198

  Fly   190 ERSSDSFIAVGWG--STGLALKPSAQLLKVK----LQRYGNWVCKKLLTRQVEEFPRGFDGNNQL 248
            :..:..:: .|||  ..|....|:..|.:|.    |....|.:.||:.:..|:...||     .:
  Rat   199 KAGTKCWV-TGWGKPDPGAPQIPTEILQEVDQSIILYEECNEMLKKMASTSVDLVKRG-----MV 257

  Fly   249 CVGSEMAQDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGIPGIYTRVYPYLGWI 309
            |...|..:|.|.|||||||..   |:...:|.:|:.|.|:.||..|.||:||.|..|..|:
  Rat   258 CAYKEGGKDACQGDSGGPLSC---EFDNRWVQIGVVSWGIGCGRKGHPGVYTDVAFYNKWL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 78/252 (31%)
Prss42NP_001100333.2 Tryp_SPc 84..315 CDD:238113 77/250 (31%)

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