DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and Tpsb2

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:261 Identity:87/261 - (33%)
Similarity:116/261 - (44%) Gaps:39/261 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IVGGHPAQPREFPHMARLGRRPDPSSRADW--FCGGVLISERFVLTAAHC--LESERGEVNVVRL 128
            ||||..|...::|....|..:     .:.|  ||||.||..::|||||||  |..:..|:..|:|
  Rat    30 IVGGREASESKWPWQVSLRFK-----FSFWMHFCGGSLIHPQWVLTAAHCVGLHIKSPELFRVQL 89

  Fly   129 GELDFDSLDEDAAPRDYMVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDER-- 191
            .|......|:...     |...:.||.|...:...||.|::|...|....:.||..||...|.  
  Rat    90 REQYLYYADQLLT-----VNRTVVHPHYYTVEDGADIALLELENPVNVSTHIHPTSLPPASETFP 149

  Fly   192 SSDSFIAVGWG--STGLALKPSAQLLKVKLQRYGNWVCKK-----LLTRQVEEFPRGFDGNNQLC 249
            |..|....|||  .:...|.|...|.:||:....|.:|.:     |.|.  ::.|...||  .||
  Rat   150 SGTSCWVTGWGDIDSDEPLLPPYPLKQVKVPIVENSLCDRKYHTGLYTG--DDVPIVQDG--MLC 210

  Fly   250 VGSEMAQDTCNGDSGGPLLMYHREYPC----MYVVVGITSAGLSCGSPGIPGIYTRVYPYLGWIA 310
            .|:..: |:|.|||||||:       |    .::..|:.|.|..|.....|||||||..||.||.
  Rat   211 AGNTRS-DSCQGDSGGPLV-------CKVKGTWLQAGVVSWGEGCAEANRPGIYTRVTYYLDWIH 267

  Fly   311 R 311
            |
  Rat   268 R 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 87/261 (33%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 86/259 (33%)

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