Protein Alignment CG11843 and Vch

DIOPT Version :10

• Sequence 1: NP_651663.1
• Gene: CG11843 / 43432
• FlyBaseID: FBgn0039630
• Length: 316
• Species: Drosophila melanogaster
• Sequence 2: NP_058841.1
• Gene: Vch / 29265
• RGDID: 598277196
• Length: 247
• Species: Rattus norvegicus
• Alignment Length: 281
• Identity: 94/281 - (33%)
• Similarity: 115/281 - (40%)
• Gaps: 62/281 - (22%)

  Fly    47 LLP-GASIESRIIDNCRSYTPLIVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVL 110
            ||| ||..|.            |:||..:.|...|:||.|....:...:..  |||.||:.:|||
  Rat    11 LLPSGAGAEE------------IIGGVESIPHSRPYMAHLDIITERGLKDS--CGGFLITRQFVL 61

  Fly   111 TAAHCLESERGEVNVVRLGELDFDSLDEDAAPRDY-----MVAGYIAHPGYEDPQFYHDIGLVKL 170
            |||||    ||....|.||.       .|.:.|:|     .|.....|..|......|||.|:||
  Rat    62 TAAHC----RGREITVTLGA-------HDVSKREYTQQKIKVEKQFIHKNYNFLPNLHDIMLLKL 115

  Fly   171 TEAVVFDLYKHPACLPFQDERSSDSFI-------AVGWGSTGLALKPSAQLLKVKLQRYGNWVCK 228
            .:.|..........||     |...||       ..|||.||:....|..|.:|.|:......||
  Rat   116 EKQVELTPAVDVVPLP-----SPSDFIHPGTLCWTAGWGRTGVKDPTSDTLREVALRIMDEEACK 175

  Fly   229 KLLTRQVEEFPRGFDGNNQLCVG-SEMAQDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCGS 292
                     ..|.:|.|.|:||| |...|....||||||||       |..||.||.|.|....:
  Rat   176 ---------IYRHYDNNFQVCVGLSTRLQTAYTGDSGGPLL-------CAGVVHGIVSYGHPDAT 224

  Fly   293 PGIPGIYTRVYPYLGWIARTL 313
            |  |.::||:.||:.||...|
  Rat   225 P--PAVFTRIAPYVPWINTVL 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11843	NP_651663.1	Tryp_SPc	68..312	CDD:238113	87/256 (34%)
Vch	NP_058841.1	Tryp_SPc	21..242	CDD:238113	87/256 (34%)