DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and Gzmm

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_063119183.1 Gene:Gzmm / 29252 RGDID:620022 Length:266 Species:Rattus norvegicus


Alignment Length:194 Identity:52/194 - (26%)
Similarity:83/194 - (42%) Gaps:35/194 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVLTAAHCLESERGEVNVVRLGELD 132
            |:||..|.|...|:|..|      .:.....|||||:.:::||||||||.....::.:|    ..
  Rat    27 IIGGREAVPHSRPYMVSL------QNTKSHVCGGVLVHQKWVLTAAHCLSEPLQQLKLV----FG 81

  Fly   133 FDSLDEDAAPRD----YMVAGYIAHPGYEDPQFYHDIGLVKLTEAV-------VFDLYKHPACLP 186
            ..||.:   |:|    :.:...|.|||| :.::.:|:.|:||...|       ...|.:.|...|
  Rat    82 LHSLHD---PQDPGLTFYIKQAIKHPGY-NLKYENDLALLKLDGRVKPSKNVKPLALPRKPRDKP 142

  Fly   187 FQDERSSDSFIAVGWGSTGLALKPSAQLLKVKLQRYGNWVCKKLLTRQVEEFPRGFDGNNQLCV 250
            .:..|.|    ..|||.|....:.:..|.::.|:.....:|..      ..|..|...::.||:
  Rat   143 AEGSRCS----TAGWGITHQRGQLAKSLQELDLRLLDTRMCNN------SRFWNGVLTDSMLCL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 52/194 (27%)
GzmmXP_063119183.1 None

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