DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and F11

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:303 Identity:91/303 - (30%)
Similarity:136/303 - (44%) Gaps:45/303 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GSCSRYKKSVF--------EERIEFG-FLLPGASIESRIIDN-CRS-YTPLIVGGHPAQPREFPH 81
            ||||..|...:        ..||..| ..:.|.::....:|| |.: ..|.:.||..:...|:|.
  Rat   337 GSCSERKGRCYLKLSSNGSPTRILHGRGGISGYTLRLCKMDNVCTTKIRPRVFGGAASVHGEWPW 401

  Fly    82 MARLGRRPDPSSRADWFCGGVLISERFVLTAAHCLE-SERGEVNVVRLGELDFDSLDEDAAPRDY 145
            ...|      .:.....|||.:|..|::||||||.. :|..:...|..|.::...::||..  .:
  Rat   402 QVTL------HTTQGHLCGGSIIGNRWILTAAHCFSGTETPKTLRVYGGIVNQSEINEDTT--FF 458

  Fly   146 MVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDERS---SDSFIAVGWGSTGLA 207
            .|...|.|..|...:...||.|:||..|:.:..::.|.|||.:.:|:   ::.:: .|||.|...
  Rat   459 RVQEMIIHDQYTSAESGFDIALLKLEPAMNYTDFQRPICLPSKGDRNVVHTECWV-TGWGYTKSR 522

  Fly   208 LKPSAQLLKVKLQRYGNWVC-----KKLLTRQVEEFPRGFDGNNQLCVG-SEMAQDTCNGDSGGP 266
            .:..:.|.|.|:....|..|     |..:|.:|            :|.| .|..:|||.||||||
  Rat   523 DEVQSTLQKAKVPLVSNEECQTRYRKHKITNKV------------ICAGYKEGGKDTCKGDSGGP 575

  Fly   267 LLMYHREYPCMYVVVGITSAGLSCGSPGIPGIYTRVYPYLGWI 309
            |...|..   ::.:|||||.|..||....||:||.|..|:.||
  Rat   576 LSCKHNG---VWHLVGITSWGEGCGQKERPGVYTNVAKYVDWI 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 78/252 (31%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519 9/36 (25%)
Tryp_SPc 388..615 CDD:238113 76/250 (30%)
Blue background indicates that the domain is not in the aligned region.

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