DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11843 and Gzmb

DIOPT Version :10

Sequence 1:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:249 Identity:82/249 - (32%)
Similarity:115/249 - (46%) Gaps:27/249 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVLTAAHCLESERGEVNVVRLGELD 132
            |:|||.|:|...|:||.|....:.|....  |||.||.|.||||||||..|   ::||. ||..:
  Rat    21 IIGGHEAKPHSRPYMAYLQIMDEYSGSKK--CGGFLIREDFVLTAAHCSGS---KINVT-LGAHN 79

  Fly   133 FDSLDEDAAPRDYMVAGYIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQD--ERSSDS 195
            ..  :::...:...|...|.||.|......:||.|:||...........|..||.::  .:..|.
  Rat    80 IK--EQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVKPGDV 142

  Fly   196 FIAVGWGSTGLALKPSAQLLKVKLQRYGNWVCKKLLTRQVEEFPRGFDGNNQLCVGS-EMAQDTC 259
            ....|||..|...|.|..|.:|:|....:..|:..|...       ||..|::|.|. ::.:.:.
  Rat   143 CYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNY-------FDKANEICAGDPKIKRASF 200

  Fly   260 NGDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGIPGIYTRVYPYLGWIARTL 313
            .|||||||:       |..|..||.|.|.:.||  .|..:|:|..:|.||.:|:
  Rat   201 RGDSGGPLV-------CKKVAAGIVSYGQNDGS--TPRAFTKVSTFLSWIKKTM 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 81/246 (33%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 81/246 (33%)

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