DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11842 and Hgfac

DIOPT Version :9

Sequence 1:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_006504094.1 Gene:Hgfac / 54426 MGIID:1859281 Length:658 Species:Mus musculus


Alignment Length:343 Identity:95/343 - (27%)
Similarity:142/343 - (41%) Gaps:75/343 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AWASAQDSDIARTCTAYKRSV--WE---------------ETSE-FSFLIENAPIIYKTL----D 64
            |:....|.|....|...|.:.  ||               :|.| .:.|.|:||.:..|.    .
Mouse   333 AYCRNPDKDERPWCYVVKDNALSWEYCRLTACESLARVHSQTPEILAALPESAPAVRPTCGKRHK 397

  Fly    65 KCTSYAPLIIGGGPAVPKEFPHAAR--LGHKDENGEVEWFCGGTLISDRHVLTAAHC--HYSPQG 125
            |.|...|.||||..::|...|..|.  :|:.        ||.|:|:....|::||||  :..|:.
Mouse   398 KRTFLRPRIIGGSSSLPGSHPWLAAIYIGNS--------FCAGSLVHTCWVVSAAHCFANSPPRD 454

  Fly   126 SVNIARLGDLEFDTNNDDADPEDFDVKDFTAHPEFSYPAIYN----DISVVRL----SRPVTFND 182
            |:.:. ||...|:...|..  :.|.::.:..:..:|   ::|    |:.::||    .|....:.
Mouse   455 SITVV-LGQHFFNRTTDVT--QTFGIEKYVPYTLYS---VFNPNNHDLVLIRLKKKGERCAVRSQ 513

  Fly   183 YKHPACLPFDDGRLGTSF-------IAIGWGQLEIVPRTENKKLQKVKLYNYG---TRCRITADR 237
            :..|.|||    ..|:||       || |||.::     |.:....|..|:..   ....:.||.
Mouse   514 FVQPICLP----EAGSSFPTGHKCQIA-GWGHMD-----EMQSSTDVSSYSNSLLEALVPLVADH 568

  Fly   238 NDELPEGYNA---TTQLCIGSNEHK-DTCNGDSGGPVLIYHMDYPCMYHVMGITSIGVACDTPDL 298
            ....||.|.|   ...||.|..:.| |.|.||||||::........:|   ||.|.|..|...:.
Mouse   569 KCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLVCEKNGVAYLY---GIISWGDGCGRLNK 630

  Fly   299 PAMYTRVHFYLDWIKQQL 316
            |.:||||..|:|||..::
Mouse   631 PGVYTRVANYVDWINDRI 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 78/267 (29%)
Tryp_SPc 73..312 CDD:214473 76/264 (29%)
HgfacXP_006504094.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011
FN1 197..237 CDD:238018
EGF_CA 242..275 CDD:238011
Kringle 283..364 CDD:333799 7/30 (23%)
Tryp_SPc 406..646 CDD:238113 78/266 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I4773
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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