DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11842 and CG16710

DIOPT Version :10

Sequence 1:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_651167.3 Gene:CG16710 / 42790 FlyBaseID:FBgn0039101 Length:372 Species:Drosophila melanogaster


Alignment Length:281 Identity:84/281 - (29%)
Similarity:116/281 - (41%) Gaps:51/281 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 IIGGGPAVPKEFPHAARL--GHKDE---NGEVEWFCGGTLISDRHVLTAAHCHYSPQGSVNIARL 132
            |.||....|.|.|..|.:  .|:..   |..:...|.|:||::|:|||||||.......:...||
  Fly   106 IFGGEETQPNELPWMALILYAHRSRSVWNERLVSRCAGSLITNRYVLTAAHCLRITGLDLRRVRL 170

  Fly   133 GDLEFDTNND---------DADPE------DFDVKD-----FTAHPEFSYPAIYNDISVVRLSRP 177
            |:....:|.|         ...||      |..:|.     |...|       ||||:::||..|
  Fly   171 GEHNILSNPDCVTHINGREHCAPEHLEIDVDLSIKHRHYMVFEERP-------YNDIALLRLKFP 228

  Fly   178 VTFNDYKHPACLPFDDGRLGTSF------IAIGWGQLEIVPRTENKKLQKVKLYNYGTRCRITAD 236
            |.:.....|.|:..|......||      || ||| |.......|..||..........|.::  
  Fly   229 VRYTAQIKPICVQLDYIFSNPSFSNHKLQIA-GWG-LSHKQGYSNVLLQAYVNGRNADECSLS-- 289

  Fly   237 RNDELPEGYNATTQLCIGSNEHKDTCNGDSGGPV--LIYHMDYPCMYHVMGITSIGVA-CDTPDL 298
               |...|.:..|.:|.|:....|||.||||||:  ::...|...:| :.||||.|.: |...  
  Fly   290 ---EPSLGLDKETHICAGNLGGNDTCKGDSGGPLMAIMERGDEEFVY-LAGITSYGYSQCGYG-- 348

  Fly   299 PAMYTRVHFYLDWIKQQLAKN 319
            ||.||:...:::||...:..|
  Fly   349 PAAYTKTSKFVEWILWNMYTN 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 83/275 (30%)
CG16710NP_651167.3 CLIP 36..84 CDD:463440
Tryp_SPc 105..362 CDD:214473 81/272 (30%)
Blue background indicates that the domain is not in the aligned region.

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