DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11842 and CG3505

DIOPT Version :10

Sequence 1:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster


Alignment Length:272 Identity:84/272 - (30%)
Similarity:122/272 - (44%) Gaps:66/272 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KEFPHAARLGHKDENGEVEWFCGGTLISDRHVLTAAHCHYSPQGS---VNIARLGDLEFDTNND- 142
            :|||..|.:.:...|.|....|||.|||||:|||||||......|   :...|||:.:..||.| 
  Fly   116 REFPWLALIEYTRGNQEKIHACGGVLISDRYVLTAAHCVAQAATSNLQITAVRLGEWDTSTNPDC 180

  Fly   143 ---------DADP--EDFDVKDFTAHPEFSYP--AIYNDISVVRLSRPVTFNDYKHPACLPFDDG 194
                     |..|  :|..:::...||.::..  ...|||::|||:.|...||:..|.|||    
  Fly   181 QYHEDSKVADCAPPYQDIAIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDFVQPICLP---- 241

  Fly   195 RLGTSFIAIGWGQLEIVPRTENKKLQKVKLYNYGT-----------RCR---ITADRNDELPEGY 245
                                 ||:|:..:|.:..|           |.|   :|....:|....|
  Fly   242 ---------------------NKQLRADELEDLVTEVAGWQASSSQRMRKGYVTISSIEECQRKY 285

  Fly   246 NATTQLCIGSNE-----HKDTCNGDSGGPVLIYHMDYPCMYHVMGITSIG-VACDTPDLPAMYTR 304
             |:.||.|.:::     :...|.|::|||::::..|   .|.:.|:.|.| |.|..||.|.:|||
  Fly   286 -ASQQLRIQASKLCGLTNSQECYGNAGGPLMLFKND---GYLLGGLVSFGPVPCPNPDWPDVYTR 346

  Fly   305 VHFYLDWIKQQL 316
            |..|:|||...|
  Fly   347 VASYIDWIHDSL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 83/269 (31%)
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 83/268 (31%)
Blue background indicates that the domain is not in the aligned region.

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