DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11842 and CG18420

DIOPT Version :9

Sequence 1:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:284 Identity:77/284 - (27%)
Similarity:121/284 - (42%) Gaps:62/284 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PIIYKT--LD-KCTSYAPL-----IIGGGPAVPKEFPHAARLGHKDENGEVEWFCGGTLISDRHV 113
            |::..|  || :|.:.:||     |:.|..||....|..|.| |...|   ::.|||||||.|.|
  Fly    19 PLLGSTQFLDSECGTRSPLKLGPRIVNGKVAVRNSSPWMAFL-HTSSN---QFICGGTLISRRLV 79

  Fly   114 LTAAHCHYSPQGSVNIARLGDLEFDTNNDDADPEDFDVKDFTAHPEFSYPAIYNDISVVRLSRPV 178
            |||||| :.|..:: :.|||:.   ........|:..|.....|..:......|||:::||...|
  Fly    80 LTAAHC-FIPNTTI-VVRLGEY---NRKLKGYREEHQVNRTFQHRFYDPNTHANDIALLRLVSNV 139

  Fly   179 TFNDYKHPACLPFDDG----------RLGTSFIAIGWGQLEIVP-----RTENKKLQKVKLYNYG 228
            .:.....|.|:.:|..          ..||     |||:.|.:.     ||.:...|..|:..:|
  Fly   140 VYKANIRPICIMWDASWKHHIDSIKVLTGT-----GWGRTESMHDSSELRTLDISRQPSKMCAFG 199

  Fly   229 TRCRITADRNDELPEGYNATTQLCIGSNEHKDTCNGDSGGPV---LIYHMDYPCMYHVMGITSIG 290
            :                ..:.|.|.| |.:.:.|.||:||||   :.|...:  .:..:||....
  Fly   200 S----------------VLSNQFCAG-NWNSNLCIGDTGGPVGAMVRYRNAF--RFVQVGIAITN 245

  Fly   291 VACDTPDLPAMYTRVHFYLDWIKQ 314
            ..|..   |:::|.|..::::|::
  Fly   246 KRCQR---PSVFTDVMSHIEFIRR 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 70/260 (27%)
Tryp_SPc 73..312 CDD:214473 69/256 (27%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 69/257 (27%)
Tryp_SPc 43..267 CDD:238113 70/260 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437578
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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