DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11842 and Habp2

DIOPT Version :9

Sequence 1:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001316864.1 Gene:Habp2 / 226243 MGIID:1196378 Length:554 Species:Mus musculus


Alignment Length:279 Identity:78/279 - (27%)
Similarity:109/279 - (39%) Gaps:87/279 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 HAARL---GHKDENGEVEW------------------FCGGTLISDRHVLTAAHCHYSPQGSVNI 129
            ||.:.   |.|...|:..|                  ||||.||....|||||||     ..:|.
Mouse   303 HAVKRIYGGFKSTAGKHPWQVSLQTSLPLTTSMPQGHFCGGALIHPCWVLTAAHC-----TDINT 362

  Fly   130 AR----LGDLEFDTNNDDADPEDFDVKDFTAHPEFS----YPAIYNDISVVRLSRPV-----TFN 181
            ..    |||.  |....::..:.|.|:....:.:::    .|  :|||::::| :||     ..:
Mouse   363 KHLKVVLGDQ--DLKKTESHEQTFRVEKILKYSQYNERDEIP--HNDIALLKL-KPVGGHCALES 422

  Fly   182 DYKHPACLPFDDGRLGTSFIAIGWGQLEIVPRTENKKLQKVK-----------LYNYGTRCRITA 235
            .|....|||.|....||.....|||..|....:......|||           ||::      |.
Mouse   423 RYVKTVCLPSDPFPSGTECHISGWGVTETGEGSRQLLDAKVKLIANPLCNSRQLYDH------TI 481

  Fly   236 DRNDELPEGYNATTQLCIGSNEH--KDTCNGDSGGPVLIYHMDYPC----MYHVMGITSIGVACD 294
            |           .:.:|.|:.:.  .|||.||||||:       .|    .|:|.||.|.|..|.
Mouse   482 D-----------DSMICAGNLQKPGSDTCQGDSGGPL-------TCEKDGTYYVYGIVSWGQECG 528

  Fly   295 TPDLPAMYTRVHFYLDWIK 313
            ..  |.:||:|..:|:|||
Mouse   529 KK--PGVYTQVTKFLNWIK 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 78/279 (28%)
Tryp_SPc 73..312 CDD:214473 75/276 (27%)
Habp2NP_001316864.1 EGF_CA 67..103 CDD:238011
EGF_CA 150..182 CDD:238011
KR 187..271 CDD:238056
Tryp_SPc 308..547 CDD:238113 76/274 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I4773
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.