DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11842 and LOC1280238

DIOPT Version :10

Sequence 1:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_320067.5 Gene:LOC1280238 / 1280238 VectorBaseID:AGAMI1_011464 Length:794 Species:Anopheles gambiae


Alignment Length:284 Identity:89/284 - (31%)
Similarity:128/284 - (45%) Gaps:46/284 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NAPIIYKTLDKCTSYAPLIIGGGPAVPKEFPHAARLGHK-----------DENGEVEWFCGGTLI 108
            :||.:|.:  :|     ||.||......||||.|.||.|           |:...|.|.|||:||
Mosquito    45 HAPKLYDS--QC-----LIFGGTQVNVTEFPHMAVLGWKVKELGEGADSGDDGAGVRWQCGGSLI 102

  Fly   109 SDRHVLTAAHC-----HYSPQGSVNIARLGDLEFDTNNDDADPEDFDVKDFTAHPEFSYPAIYND 168
            :.|.|||||||     :..|:    :.||||:...:..|||..:.||:.....|||..:...|.|
Mosquito   103 TLRFVLTAAHCAADANNIPPR----LVRLGDVNLASTKDDAYAQQFDILRIVRHPEHRFSRKYFD 163

  Fly   169 ISVVRLSRPVTFNDYKHPACLPFDDGRLGTSFI-AIGWGQLEI----VPRTENKKLQKVKLYNYG 228
            :::|.|...|...:...||||..:...|...|. ..|:|::.:    ||......|....    .
Mosquito   164 LALVELDGVVRLTEGVCPACLWTNSKVLPAQFFQTAGFGEITLGGGSVPTLLKTALSATD----P 224

  Fly   229 TRCRITADRNDELPEGYNATTQLCIGSNEHKDTCNGDSGGPVLI----YHMDYPCMYHVMGITSI 289
            |.|..:......||||.. ..|:| .|..:.|||.||||||:.:    |..::|   .::.:||.
Mosquito   225 TECSESFKYIRGLPEGIR-HDQVC-ASMLNADTCQGDSGGPLQVSLRSYSTEHP---FLVALTSF 284

  Fly   290 GVACDTPDLPAMYTRVHFYLDWIK 313
            |..|.... ..:|.:|..::.||:
Mosquito   285 GRGCGIGS-SGVYQQVAAHIPWIE 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 84/266 (32%)
LOC1280238XP_320067.5 None

Return to query results.
Submit another query.