DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11841 and Hgfac

DIOPT Version :10

Sequence 1:NP_651661.1 Gene:CG11841 / 43430 FlyBaseID:FBgn0039628 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_006504094.1 Gene:Hgfac / 54426 MGIID:1859281 Length:658 Species:Mus musculus


Alignment Length:357 Identity:96/357 - (26%)
Similarity:149/357 - (41%) Gaps:77/357 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVFSLSSSLVQG-------QNPD----PFAQL--------------ACTKFKQIVFEERVAISF 50
            |.|.|::::::.|       :|||    |:..:              ||....::..:....::.
Mouse   316 LHVDSVAAAVLLGLGPHAYCRNPDKDERPWCYVVKDNALSWEYCRLTACESLARVHSQTPEILAA 380

  Fly    51 FFTDAPITYETVDSCHGS----RPLIVDGTPAEPKEFPFAAR--LGHRKTNNEIKWFCGGTLISN 109
            ....||....|....|..    ||.|:.|:.:.|...|:.|.  :|:.        ||.|:|:..
Mouse   381 LPESAPAVRPTCGKRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYIGNS--------FCAGSLVHT 437

  Fly   110 RLVLTAAHCFFSE--HGEVNVVRLGELEFDTDTDDAEPEDFGVLALKAHPGFE--NPQLYNDIGI 170
            ..|::|||||.:.  ...:.|| ||:..|:..||  ..:.||:.....:..:.  ||. .:|:.:
Mouse   438 CWVVSAAHCFANSPPRDSITVV-LGQHFFNRTTD--VTQTFGIEKYVPYTLYSVFNPN-NHDLVL 498

  Fly   171 VQL----DREVKFNRYKHPACLP-----FDDGEQHESFIAIGWGQKKFAQKE------SKKLLKV 220
            ::|    :|....:::..|.|||     |..|  |:..|| |||.....|..      |..||:.
Mouse   499 IRLKKKGERCAVRSQFVQPICLPEAGSSFPTG--HKCQIA-GWGHMDEMQSSTDVSSYSNSLLEA 560

  Fly   221 QLQGYKDRCVSS--VDANDELPNGYEPKSQLCIGSRDNK-DTCNGDSGGPVLAYHKDLACMYHVM 282
            .:....|...||  |...|..||      .||.|..|.| |.|.||||||::.....:|.:|   
Mouse   561 LVPLVADHKCSSPEVYGADISPN------MLCAGYFDCKSDACQGDSGGPLVCEKNGVAYLY--- 616

  Fly   283 GITSAGITCSTPDIPSAYTRVHYFLNWIKGEL 314
            ||.|.|..|...:.|..||||..:::||...:
Mouse   617 GIISWGDGCGRLNKPGVYTRVANYVDWINDRI 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11841NP_651661.1 Tryp_SPc 72..311 CDD:238113 79/262 (30%)
HgfacXP_006504094.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011
FN1 197..237 CDD:238018
EGF_CA 242..275 CDD:238011
Kringle 283..364 CDD:395005 8/47 (17%)
Tryp_SPc 406..646 CDD:238113 80/263 (30%)
Blue background indicates that the domain is not in the aligned region.

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