DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11841 and st14

DIOPT Version :10

Sequence 1:NP_651661.1 Gene:CG11841 / 43430 FlyBaseID:FBgn0039628 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_012821897.2 Gene:st14 / 448647 XenbaseID:XB-GENE-1008784 Length:845 Species:Xenopus tropicalis


Alignment Length:265 Identity:78/265 - (29%)
Similarity:117/265 - (44%) Gaps:39/265 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 GSRPL-----IVDGTPAEPKEFPFAARLGHRKTNNEIKWFCGGTLISNRLVLTAAHCFFSEHGEV 126
            |.||.     ||.|..|:..|||:...| |.|.|   |..||.:|:|..::::|||||..:..  
 Frog   595 GKRPFTKKSRIVGGVNADTGEFPWQVSL-HVKGN---KHTCGASLVSPTMLISAAHCFQDDQS-- 653

  Fly   127 NVVRLGELEFDTD----TDDAEPEDFGVLALK-----AHPGFENPQLYNDIGIVQLDREVKFNRY 182
              :|..:....|.    .|.|:.....|:..|     ||.||.:....|||.:::|::.|.:..:
 Frog   654 --MRYSDASLWTAYLGLHDQAQLNSKDVVERKIKRIMAHIGFNDNTYDNDISVLELEKPVDYTDF 716

  Fly   183 KHPACLP-----FDDGEQHESFIAIGWGQKKFAQKESKKLLKVQLQGYKDRCVSSVDANDELPNG 242
            ..|.|:|     |..|   :.....|||..|.....:..|.|.::     |.::..:.|..|...
 Frog   717 IQPICIPESTHDFPVG---KPIWVTGWGALKEGGGAAVILQKAEI-----RIINQTECNKLLDGQ 773

  Fly   243 YEPKSQLCIG-SRDNKDTCNGDSGGPVLAYHKDLACMYHVMGITSAGITCSTPDIPSAYTRVHYF 306
            ..|: .||.| .....|.|.||||||:.:.  :|....::.||.|.|..|:..:.|..||||...
 Frog   774 LTPR-MLCAGFVSGGIDACQGDSGGPLSSV--ELNNKVYLAGIVSWGEGCARRNKPGVYTRVAMM 835

  Fly   307 LNWIK 311
            .:||:
 Frog   836 RDWIR 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11841NP_651661.1 Tryp_SPc 72..311 CDD:238113 74/253 (29%)
st14XP_012821897.2 SEA 76..167 CDD:460188
CUB 216..320 CDD:238001
CUB 328..432 CDD:238001
LDLa 442..474 CDD:238060
LDLa 476..511 CDD:238060
LDLa 513..547 CDD:238060
LDLa 554..587 CDD:197566
Tryp_SPc 604..839 CDD:214473 73/253 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.