DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11841 and Mcpt1

DIOPT Version :10

Sequence 1:NP_651661.1 Gene:CG11841 / 43430 FlyBaseID:FBgn0039628 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_742041.1 Gene:Mcpt1 / 29266 RGDID:621058 Length:247 Species:Rattus norvegicus


Alignment Length:243 Identity:70/243 - (28%)
Similarity:109/243 - (44%) Gaps:28/243 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IVDGTPAEPKEFPFAARLGHRKTNNEIKWFCGGTLISNRLVLTAAHCFFSEHGEVNVVRLGELEF 136
            |:.|..:.|...|:.|.| ...|...::..|||.|||.:.|||||||   :..|:.|: ||  ..
  Rat    21 IIGGVESIPHSRPYMAHL-DIVTEKGLRVICGGFLISRQFVLTAAHC---KGREITVI-LG--AH 78

  Fly   137 DTDTDDAEPEDFGVLALKAHPGFENPQLYNDIGIVQLDREVKFNRYKHPACLPFDDGEQHESFI- 200
            |....::..:...|.....|..:.:....:||.:::|:::|:.....:...||......|...: 
  Rat    79 DVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMC 143

  Fly   201 -AIGWGQKKFAQKESKKLLKVQLQGYKDR-CVSSVDANDELPNGYEPKSQLCIGSRDN-KDTCNG 262
             |.|||:.......|..|.:|:|:...:: ||..        ..||.|.|:|:||... :....|
  Rat   144 WAAGWGKTGVRDPTSYTLREVELRIMDEKACVDY--------RYYEYKFQVCVGSPTTLRAAFMG 200

  Fly   263 DSGGPVLAYHKDLACMYHVMGITSAGITCSTPDIPSAYTRVHYFLNWI 310
            |||||:|       |.....||.|.|...:.|  |:.:|||..::.||
  Rat   201 DSGGPLL-------CAGVAHGIVSYGHPDAKP--PAIFTRVSTYVPWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11841NP_651661.1 Tryp_SPc 72..311 CDD:238113 70/243 (29%)
Mcpt1NP_742041.1 Tryp_SPc 21..242 CDD:238113 70/243 (29%)

Return to query results.
Submit another query.