DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11841 and Tmprss2

DIOPT Version :10

Sequence 1:NP_651661.1 Gene:CG11841 / 43430 FlyBaseID:FBgn0039628 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:268 Identity:64/268 - (23%)
Similarity:106/268 - (39%) Gaps:68/268 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IVDGTPAEPKEFPFAARLGHRKTNNEIKWFCGGTLISNRLVLTAAHC------------------ 118
            ||.|:.|.|.::|:...|..:..:     .|||::|:...::|||||                  
  Rat   254 IVGGSTASPGDWPWQVSLHVQGIH-----VCGGSIITPEWIVTAAHCVEEPLSSPRYWTAFAGIL 313

  Fly   119 -----FFSEHGEVNVVRLGELEFDTDTDDAEPEDFGVLALKAHPGFENPQLYNDIGIVQLDREVK 178
                 |:....:|..|                        .:||.:::....|||.:::|...:.
  Rat   314 KQSLMFYGSRHQVEKV------------------------ISHPNYDSKTKNNDIALMKLQTPLA 354

  Fly   179 FNRYKHPACLPFDDGEQ----HESFIAIGWGQKKFAQKESKKLLKVQLQGYK-DRCVSSVDANDE 238
            ||....|.||| :.|..    .|.:|: |||......|.|..|....:...: .:|.|..     
  Rat   355 FNDVVKPVCLP-NPGMMLDLAQECWIS-GWGATYEKGKTSDVLNAAMVPLIEPSKCNSKY----- 412

  Fly   239 LPNGYEPKSQLCIG-SRDNKDTCNGDSGGPVLAYHKDLACMYHVMGITSAGITCSTPDIPSAYTR 302
            :.|.....:.:|.| .:.:.|:|.||||||::....::   :.::|.||.|..|:....|..|..
  Rat   413 IYNNLITPAMICAGFLQGSVDSCQGDSGGPLVTLKNEI---WWLIGDTSWGSGCAKAYRPGVYGN 474

  Fly   303 VHYFLNWI 310
            |..|.:||
  Rat   475 VTVFTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11841NP_651661.1 Tryp_SPc 72..311 CDD:238113 64/268 (24%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 64/268 (24%)
Blue background indicates that the domain is not in the aligned region.

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