Protein Alignment CG11837 and rsmA

DIOPT Version :10

• Sequence 1: NP_651660.1
• Gene: CG11837 / 43429
• FlyBaseID: FBgn0039627
• Length: 306
• Species: Drosophila melanogaster
• Sequence 2: NP_414593.1
• Gene: rsmA / 944939
• ECOCYCID: EG10523
• Length: 273
• Species: Escherichia coli
• Alignment Length: 234
• Identity: 78/234 - (33%)
• Similarity: 115/234 - (49%)
• Gaps: 23/234 - (9%)

  Fly    10 SRIHNDVQKQGIVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERAKKV 74
            :|:|     ||.:..|.|||:.|.:..||.:::.....:....::|||||...:|..:.||..::
E. coli     3 NRVH-----QGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQL 62

  Fly    75 IACEIDTRLAAELQKRVQATP-LQPKLQVLIGDFLKAELPFFDLC---------IANVPYQISSP 129
            ...|:|..|||    |:|..| |.|||.:...|.:  ...|.:|.         ..|:||.||:|
E. coli    63 TVIELDRDLAA----RLQTHPFLGPKLTIYQQDAM--TFNFGELAEKMGQPLRVFGNLPYNISTP 121

  Fly   130 LIFKLLLHRPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPK 194
            |:|.|..:.........|.|:|...||||.|..|.|.|||:..|....|..:::|..:.|.||||
E. coli   122 LMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPK 186

  Fly   195 VESSVVRLEP--KNPPPPVNFTEWDGLTRIAFLRKNKTL 231
            |:|:||||.|  ..|.|..:......:|..||.::.||:
E. coli   187 VDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTI 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11837	NP_651660.1	PTZ00338	16..305	CDD:240367	76/228 (33%)
rsmA	NP_414593.1	RsmA	1..268	CDD:439801	78/234 (33%)