Protein Alignment CG11837 and mtTFB1

DIOPT Version :10

• Sequence 1: NP_651660.1
• Gene: CG11837 / 43429
• FlyBaseID: FBgn0039627
• Length: 306
• Species: Drosophila melanogaster
• Sequence 2: NP_648499.1
• Gene: mtTFB1 / 8674019
• FlyBaseID: FBgn0261381
• Length: 330
• Species: Drosophila melanogaster
• Alignment Length: 295
• Identity: 81/295 - (27%)
• Similarity: 129/295 - (43%)
• Gaps: 51/295 - (17%)

  Fly    25 KDFGQHILKNPLVITTMLEKAALR--ATDVVLEIGPGTGNMTVRMLER-AKKVIACEIDTRLAAE 86
            |...|:.|.:.. :|..:.|:|.|  ..|:|||:|||.|.:|..:|.| .::::..|.|.|....
  Fly    34 KQLSQNFLMDER-LTDKIVKSAGRIDPRDLVLEVGPGPGGITRSILRRHPQRLLLVEKDPRFGET 97

  Fly    87 LQKRVQ-ATPLQPKLQVLIGDFLKAELPFFDL------------CIANVPYQISSPLIFK----L 134
            ||...: |:||..:..:...|.|:     |::            .|.|:|:.||:.|:..    |
  Fly    98 LQLLKECASPLNIQFDIHYDDILR-----FNIEQHIPDTSQRIHLIGNLPFAISTRLLINWLDDL 157

  Fly   135 LLHRPLFR----CAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKV 195
            ...|..||    |..|.||:|.|||:.|..|.:..||||:.:|:.....|...:....|.|.|:|
  Fly   158 AARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQV 222

  Fly   196 ESSVVRLEP-KNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVTSVLEMLEKNYKLYRSLRNEPI 259
            :..||:|.| |.|...:.|...:.:.|..|..:.|...                :.|.:|.  |.
  Fly   223 DVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQKYCR----------------RGYGTLL--PP 269

  Fly   260 EDDFKMQDKVISILEEQDMAAKRARSMDIDDFMRL 294
            ||..::.:|:....|.||  ..|...:.::..:||
  Fly   270 EDREEVAEKLFQRAEVQD--TLRPFELTVEQCLRL 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11837	NP_651660.1	PTZ00338	16..305	CDD:240367	81/295 (27%)
mtTFB1	NP_648499.1	RsmA	26..309	CDD:439801	81/295 (27%)