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Protein Alignment CG11837 and Tfb2m

DIOPT Version :9

Sequence 1:	NP_651660.1	Gene:	CG11837 / 43429	FlyBaseID:	FBgn0039627	Length:	306	Species:	Drosophila melanogaster
Sequence 2:	NP_001008294.1	Gene:	Tfb2m / 289307	RGDID:	1307091	Length:	397	Species:	Rattus norvegicus

Alignment Length:	330	Identity:	66/330 - (20%)
Similarity:	119/330 - (36%)	Gaps:	103/330 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 KDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERAKKVIACEIDTRLAAELQK 89
            :|..:|  :||             :..::||..||.|.:|..:|:...:|:|.|.:......|:.
  Rat    86 RDLLEH--QNP-------------SHQLILECNPGPGILTGALLKAGARVVAFESEKMFIPHLES 135

  Fly    90 -------RVQAT-----PLQPKLQVLIGDFLKAELPFFDLCIANVPYQISSP------------- 129
                   .:|..     .:.|:.|.|:...:.:...|.:|.|..||:....|
  Rat   136 LRKNADGELQVVHCDFFKIDPRYQELVRPDVNSHTIFQNLGIKAVPWSAGVPIKVFGILPNKHER 200

  Fly   130 -LIFKLLLHRPLFRCAVL---------MF--QREFAERLVAKP-GDKLYCRLSINTQLLARVDML 181
             |::|:|.  .|:.|..:         ||  ::|| .:|:|.| ...||..|.:..|:...:..|
  Rat   201 RLLWKILF--DLYSCESIYRYGRVELNMFISEKEF-RKLIATPKRPDLYQVLGVLWQVACEIKFL 262

  Fly   182 MKVGKNNFRPPPK---VESS--------------VVRLEPKNP-----PPPVNFTEWDGLTRIAF 224
            .....::|....:   :|.|              :||:.|:..     ..|:|:..:..|.:..|
  Rat   263 HMEPWSSFSVHAENGHLEKSKHSESLNLLKQNLYLVRMTPRRTLFTENLSPLNYDMFFHLVKHCF 327

  Fly   225 LRKNKTLAATFKVTSVLEMLEKNYKLYRSLRNEPIEDDFKMQDKVISILEEQDMAAKRARSMDID 289
            .::|..:....:..|.::.:    .:.|.:|..|                 .|.|||    |...
  Rat   328 GKRNAPIIHHLRSLSTVDPI----NILRQIRKRP-----------------GDTAAK----MYPH 367

  Fly   290 DFMRL 294
            ||.||
  Rat   368 DFKRL 372

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.