DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11837 and cdh1

DIOPT Version :10

Sequence 1:NP_651660.1 Gene:CG11837 / 43429 FlyBaseID:FBgn0039627 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_596122.1 Gene:cdh1 / 2540247 PomBaseID:SPBC336.02 Length:307 Species:Schizosaccharomyces pombe


Alignment Length:304 Identity:175/304 - (57%)
Similarity:227/304 - (74%) Gaps:7/304 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KSRIHN-------DVQKQGIVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVR 66
            |.|:.|       :|:.....|||||||||||||||...:::||.|:.:|.|||:||||||:|||
pombe     3 KIRVRNNNAASDAEVRNTVFKFNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNLTVR 67

  Fly    67 MLERAKKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDLCIANVPYQISSPLI 131
            |||:|:||||.|:|.|:|||:.||||.||.:.||||::||.:|.:||:||:|::|.||||||||:
pombe    68 MLEKARKVIAVEMDPRMAAEITKRVQGTPKEKKLQVVLGDVIKTDLPYFDVCVSNTPYQISSPLV 132

  Fly   132 FKLLLHRPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVE 196
            ||||..||..|.|:||||||||.||||:|||.||||||.|.|:.|.|..:||||||||||||.||
pombe   133 FKLLQQRPAPRAAILMFQREFALRLVARPGDPLYCRLSANVQMWAHVKHIMKVGKNNFRPPPLVE 197

  Fly   197 SSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVTSVLEMLEKNYKLYRSLRNEPIED 261
            |||||:||||||||:.|.|||||.||.|||||||:.|.||.:|::||:|.||:.:.|.....:|:
pombe   198 SSVVRIEPKNPPPPLAFEEWDGLLRIVFLRKNKTIGACFKTSSIIEMVENNYRTWCSQNERMVEE 262

  Fly   262 DFKMQDKVISILEEQDMAAKRARSMDIDDFMRLLLAFNSAGIHF 305
            ||.::..:..:|::.::...||......:|:.||.||:..|:||
pombe   263 DFDVKSLIDGVLQQCNLQDARASKCGQTEFLSLLHAFHQVGVHF 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11837NP_651660.1 PTZ00338 16..305 CDD:240367 170/288 (59%)
cdh1NP_596122.1 PTZ00338 22..306 CDD:240367 169/283 (60%)

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