DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc98E and Prkcq

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001263650.1 Gene:Prkcq / 85420 RGDID:620968 Length:707 Species:Rattus norvegicus


Alignment Length:729 Identity:307/729 - (42%)
Similarity:428/729 - (58%) Gaps:86/729 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QLIDPYVSIDVDE----SHFDRATTRPKTFDPVWNEQFVHDVTN-------VSNINLTVFHDAAL 89
            :.::||.::.|.|    .:......:..|..|.|:..|...:..       |...|:.:..:..:
  Rat    23 EAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKGRVMQIIVKGKNVDLISETTV 87

  Fly    90 PPDDFVANCIISFEDLMQSETAVQDLWVNLEPQGKI----HVIIELKNRTDKAKAEAVVEHTVAV 150
            .        :.|..:..:......::|:.|:|||::    ...:|:.:..|.:            
  Rat    88 E--------LYSLAERCRKNNGRTEIWLELKPQGRMLMNARYFLEMSDTKDMS------------ 132

  Fly   151 NKEFKERAGF---NRRRGAMRR-RVHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCT 211
              || |..||   :.||||::: :||.|..|:|.|||..||||||.|.||:||:.||||||:.|.
  Rat   133 --EF-ENEGFFALHHRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCN 194

  Fly   212 LVVHKKCHLSVVSKCPG----MRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLL 272
            ..:||||...|::||.|    .|:....|       :||.:::||||.|::||..|||:|||:||
  Rat   195 AAIHKKCIDKVIAKCTGSAINSRETMFHK-------ERFKIDMPHRFKVYNYKSPTFCEHCGTLL 252

  Fly   273 YGLIKQGLQCETCGMNVHKRCQKNVANTCGINTKQMAEILSSLGISPDKQQPRRSKYLNQQGG-E 336
            :||.:|||:|:.||||||.|||..|||.||||.|.|||.|:.:..:...:..|.|:::.::|. |
  Rat   253 WGLARQGLKCDACGMNVHHRCQTKVANLCGINQKLMAEALAMIESTQQARTLRDSEHIFREGPIE 317

  Fly   337 DNYGASLGAD---------GDGAP-GQSFRSCALSVDSLATSTTTMTSGYNSSSCMSLAVTGSGG 391
            .::..|:.::         |...| |..:.|.....|..|.......:...:|..:.|.:.    
  Rat   318 ISFPRSIKSETRPPCVPTPGKKEPQGICWESPLDGADKTAQPPEPEVNLQRASLQLKLKID---- 378

  Fly   392 VGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTE 456
                           ||...|:|||||||||.|||.|.|.:.:|||.||||.::.||||:|||.|
  Rat   379 ---------------DFILHKMLGKGSFGKVFLAEFKRTKQFFAIKALKKDVVLMDDDVECTMVE 428

  Fly   457 KRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQ 521
            ||:|:||..|||||.:...|||.:.|||||||:||||||:.||...:|:.|||.|||||:.|.||
  Rat   429 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 493

  Fly   522 FLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEILKEQEYGA 586
            |||:.|::||||||||||||::||.|:||||||||.::....|.||||||||||||||..|:|..
  Rat   494 FLHSKGIVYRDLKLDNILLDRDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNH 558

  Fly   587 SVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLG 651
            |||||:.|||:|||:.||.||...:|:|||.||..|:..||.||.|||..:|.....:.||:|||
  Rat   559 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEREAKDLLVKLFVREPEKRLG 623

  Fly   652 CTGDENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIGNEVVRC 716
            ..||   ||:||.|.:::|:|||::.|.||||||:|:|.|.:|||.||..|.|.|:.....::..
  Rat   624 VRGD---IRQHPLFREINWEELERKEIDPPFRPKVKSPYDCSNFDKEFLSEKPRLSFADRALINS 685

  Fly   717 INQDEFAGFSFVNP 730
            ::|:.|:.|||:||
  Rat   686 MDQNMFSNFSFINP 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981 17/112 (15%)
C1_1 177..228 CDD:278556 30/50 (60%)
C1_1 252..304 CDD:278556 34/51 (67%)
STKc_nPKC_epsilon 412..729 CDD:270743 183/316 (58%)
PrkcqNP_001263650.1 C1_1 160..212 CDD:278556 30/51 (59%)
C1_1 232..284 CDD:278556 34/51 (67%)
STKc_nPKC_theta 374..704 CDD:270770 188/348 (54%)
S_TKc 380..634 CDD:214567 156/256 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 87 1.000 Domainoid score I7803
eggNOG 1 0.900 - - E1_KOG0694
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222529at2759
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.