DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc98E and AGC1.7

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001185434.1 Gene:AGC1.7 / 844265 AraportID:AT1G79250 Length:555 Species:Arabidopsis thaliana


Alignment Length:495 Identity:127/495 - (25%)
Similarity:214/495 - (43%) Gaps:133/495 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 LIKQGLQCETCGMNVHKRCQKN--VANTCGINTKQMAEILSSLGISPDKQQPRRSKYLNQQGGED 337
            |||.    |..|...|.|...:  :.::.|.|   |.|..|:|...|           |.....:
plant    53 LIKP----EPAGFTNHHRPNPSPKIPSSPGSN---MTESQSNLNTKP-----------NNNNSNN 99

  Fly   338 NYGASLGADGDGAPGQSFRSCALSVDSLATSTTTMTSG----YNSSSCMSLAVTGSGGVGATGET 398
            |...|              |.:.|::|.:::.:...:|    :::.:.::     |.||      
plant   100 NSNMS--------------SRSNSIESTSSNPSKPHTGGDIRWDAVNTLT-----SKGV------ 139

  Fly   399 RPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALA 463
               :..:.||..:|.||.|..|.|.|.|.:||...:|:||:.|.::...:.:....||:.||: .
plant   140 ---QLGISDFRLLKRLGYGDIGSVYLVELRGTITYFAMKVMDKASLASRNKLLRAQTEREILS-Q 200

  Fly   464 ANHPFLTALHSCFQTPDRLFFVMEYVNGGDL--MFQIQKARRFEASRAAFYAAEVTLALQFLHTH 526
            .:||||..|:|.|:|......|||:..||:|  :.|.|..:.|....|.|:|:||.|||::||..
plant   201 LDHPFLPTLYSHFETDKFYCLVMEFCGGGNLYSLRQKQPNKCFTEDAARFFASEVLLALEYLHML 265

  Fly   527 GVIYRDLKLDNILLDQEGHCKLADF-------------------------------GMCKEG--- 557
            |::|||||.:|:|:..:||..|:||                               |:..|.   
plant   266 GIVYRDLKPENVLVRDDGHIMLSDFDLSLRCSVSPTLVKSSSVHAAGGGSGSSRPVGLIDEDAAV 330

  Fly   558 -----------------------------IMNGML-----------TTTFCGTPDYIAPEILKEQ 582
                                         .:||.:           :.:|.||.:|:||||::.:
plant   331 QGCIQPSTFFPRILQSSKKNRKAKSDFGLFVNGSMPELMAEPTNVKSMSFVGTHEYLAPEIIRGE 395

  Fly   583 EYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYP--VWLSREAVSILKGFLTKN 645
            .:|::||||..|:.:||::.|..||:.........:::...:.:|  ..:|..|..::||.|.|.
plant   396 GHGSAVDWWTFGIFIYELLYGATPFKGQGNRATLHNVIGQALRFPEVPHVSSAARDLIKGLLVKE 460

  Fly   646 PEQRLGCTGDENEIRKHPFFAKLDWKELEKRNIKPPFRPK 685
            |::|:.......||::||||..::|..:  |:..||..|:
plant   461 PQKRIAYKRGATEIKQHPFFEGVNWALI--RSATPPHVPE 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981
C1_1 177..228 CDD:278556
C1_1 252..304 CDD:278556 8/30 (27%)
STKc_nPKC_epsilon 412..729 CDD:270743 101/352 (29%)
AGC1.7NP_001185434.1 STKc_phototropin_like 144..501 CDD:270726 103/358 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I1276
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.