DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and RSH3

DIOPT Version :9

Sequence 1:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_173094.4 Gene:RSH3 / 838214 AraportID:AT1G16440 Length:499 Species:Arabidopsis thaliana


Alignment Length:522 Identity:136/522 - (26%)
Similarity:221/522 - (42%) Gaps:132/522 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 LIKQGLQCETCGMNVHKRCQKNVAN-TCGINTKQMAEILSSLGISPDKQQPRRSKYLNQQGGEDN 338
            |:|.|.:..:...:.|:....|.:| .|                  .:|:||:.|   |:..|.|
plant     2 LLKPGNKLVSPETSHHRDSASNSSNHKC------------------QQQKPRKDK---QKQVEQN 45

  Fly   339 YGASLGADGDGAPGQSFRSCALSVDSLATSTTTMTSGYN------SSSCMSLAVTGSGGVGATGE 397
                              :..:....:.:.:|.:.|.:|      |::..|.:...|......|:
plant    46 ------------------TKKIEEHQIKSESTLLISNHNVNMSSQSNNSESTSTNNSSKPHTGGD 92

  Fly   398 ----------TRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTD--EIYAIKVLKKDAIIQDDDV 450
                      :|..|..:.||..:|.||.|..|.|.|.|.||.:  ..:|:||:.|.:::..:.:
plant    93 IRWDAVNSLKSRGIKLGISDFRVLKRLGYGDIGSVYLVELKGANPTTYFAMKVMDKASLVSRNKL 157

  Fly   451 DCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDL--MFQIQKARRFEASRAAFYA 513
            ....||:.||: ..:||||..|:|.|:|......|||:.:||:|  :.|.|..:.|....|.|:|
plant   158 LRAQTEREILS-QLDHPFLPTLYSHFETDKFYCLVMEFCSGGNLYSLRQKQPNKCFTEDAARFFA 221

  Fly   514 AEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGM---CKEG-----IMNGMLTT----- 565
            :||.|||::||..|::|||||.:|:|:..:||..|:||.:   |...     ..||..||     
plant   222 SEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCSVNPTLVKSFNGGGTTGIIDD 286

  Fly   566 ------------------------------------------------TFCGTPDYIAPEILKEQ 582
                                                            :|.||.:|:||||:|.:
plant   287 NAAVQGCYQPSAFFPRMLQSSKKNRKSKSDFDGSLPELMAEPTNVKSMSFVGTHEYLAPEIIKNE 351

  Fly   583 EYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVW--LSREAVSILKGFLTKN 645
            .:|::||||..|:.:||::.|..||:.........:::...:.:|.:  :|..|..::||.|.|.
plant   352 GHGSAVDWWTFGIFIYELLHGATPFKGQGNKATLYNVIGQPLRFPEYSQVSSTAKDLIKGLLVKE 416

  Fly   646 PEQRLGCTGDENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTPIG 710
            |:.|:.......||::||||..::|..:  |...||..|:   |.|   |.....||...|.|..
plant   417 PQNRIAYKRGATEIKQHPFFEGVNWALI--RGETPPHLPE---PVD---FSCYVKKEKESLPPAA 473

  Fly   711 NE 712
            .|
plant   474 TE 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981
C1_1 177..228 CDD:278556
C1_1 252..304 CDD:278556 7/29 (24%)
STKc_nPKC_epsilon 412..729 CDD:270743 111/368 (30%)
RSH3NP_173094.4 STKc_phototropin_like 111..457 CDD:270726 106/351 (30%)
S_TKc 113..436 CDD:214567 97/323 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I1276
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.960

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