DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc98E and AT3G17850

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_188412.2 Gene:AT3G17850 / 821054 AraportID:AT3G17850 Length:1296 Species:Arabidopsis thaliana


Alignment Length:582 Identity:158/582 - (27%)
Similarity:253/582 - (43%) Gaps:160/582 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 LSVVSKCPGMRDEQPAKVEMVPAGQRFNVN-LPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCE 283
            |:.::||..  |..|...:.:|    |.:: |....||...::|               ..|..|
plant   776 LADIAKCAA--DAIPGDDQSIP----FLLSCLEDLRVVIDRRKF---------------DALTVE 819

  Fly   284 TCGMNVHKRCQKNVANTCGINTKQMAEILSSLGISPDKQQPRRSKYLNQQGGEDNYGASLGADGD 348
            |.|..:.|..::...:.|.:...:..::||::   .|:..|.          ||:.         
plant   820 TFGTRIEKLIREKYVHMCELMDDEKVDLLSTV---IDEDAPL----------EDDV--------- 862

  Fly   349 GAPGQSFRSCALSVDSLATSTTTMTSGYNSSSCMSLAVTGSGGVGATGETRP-GKCSLLDFNFIK 412
                         |.||.||                            ...| .:.|:.||..||
plant   863 -------------VRSLRTS----------------------------PVHPRDRTSIDDFEIIK 886

  Fly   413 VLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTALHSCFQ 477
            .:.:|:||:|.||:|:.|.:::|||||||..:|:.:.|:..:.|:.|| :...:||:......|.
plant   887 PISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDIL-INVRNPFVVRFFYSFT 950

  Fly   478 TPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQ 542
            ..|.|:.||||:|||||...::.....|......|.|||.|||::||:.||::||||.||:|:..
plant   951 CRDNLYLVMEYLNGGDLYSLLRNLGCLEEDIVRVYIAEVVLALEYLHSEGVVHRDLKPDNLLIAH 1015

  Fly   543 EGHCKLADFGMCKEGIMNG-------------------------------MLTTTFCGTPDYIAP 576
            :||.||.|||:.|.|::|.                               ....:..|||||:||
plant  1016 DGHIKLTDFGLSKVGLINSTDDLAGPAVSGTSLLDEEESRLAASEEQLERRKKRSAVGTPDYLAP 1080

  Fly   577 EILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLY---PVWLSREAVSIL 638
            |||....:||:.|||::|::::|::.|.|||.|::..::||:|::..:.:   |..:|.||..|:
plant  1081 EILLGTGHGATADWWSVGIILFELIVGIPPFNAEHPQQIFDNILNRKIPWPHVPEEMSAEAHDII 1145

  Fly   639 KGFLTKNPEQRLGCTGDENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFT--K 701
            ..|||::|.||||..| ..|:::|.||..::|..|.::  |..|.|..::..|.:.|.:.::  .
plant  1146 DRFLTEDPHQRLGARG-AAEVKQHIFFKDINWDTLARQ--KAAFVPASESAIDTSYFRSRYSWNT 1207

  Fly   702 EDPVLTPIG------------------------NEVVRCINQDE----------FAGFSFVN 729
            .|....|.|                        .|...|....|          |:.|||.|
plant  1208 SDEQFFPSGEVPDYSDADSMTNSSGCSSNHHEEGEAEECEGHAEFESGIPVDYSFSNFSFKN 1269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 3/9 (33%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 10/53 (19%)
STKc_nPKC_epsilon 412..729 CDD:270743 124/386 (32%)
AT3G17850NP_188412.2 STKc_MAST_like 888..1176 CDD:270731 106/289 (37%)
Blue background indicates that the domain is not in the aligned region.

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