DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc98E and AT3G10540

DIOPT Version :10

Sequence 1:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_187665.2 Gene:AT3G10540 / 820219 AraportID:AT3G10540 Length:486 Species:Arabidopsis thaliana


Alignment Length:388 Identity:116/388 - (29%)
Similarity:183/388 - (47%) Gaps:45/388 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 TMTSGYNSSSCMSLAVTGSGGVGATGETRPGKCSLL-----------DFNFIKVLGKGSFGKVML 424
            ||...::|.      :|..|...:.|||.....|..           ||...|:.|.||:.||:.
plant     3 TMDKEFDSK------LTLQGNSSSNGETISRSKSFAFKAPQENFTYHDFELGKIYGVGSYSKVVR 61

  Fly   425 AEKKGTDEIYAIKVLKKDAIIQDDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYV 489
            |:||....:||:|::.|..|.:::.......| ||:.....||.:..|...||....|:..:|..
plant    62 AKKKDNGTVYALKIMDKKFITKENKTAYVKLE-RIVLDQLEHPGIVKLFFTFQDTQSLYMALESC 125

  Fly   490 NGGDLMFQIQKARRFEASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMC 554
            .||:|..||.:..|.....|.||:|||..||:::|..|:|:||:|.:|:||..:||.|:||||..
plant   126 EGGELFDQITRKGRLSEDEARFYSAEVVDALEYIHNMGLIHRDIKPENLLLTLDGHIKIADFGSV 190

  Fly   555 KEGIMNGMLTT-----------TFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFE 608
            |. :.:..:|.           ||.||..|:.||:|.........|.||||..:|:|::|..||:
plant   191 KP-MQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK 254

  Fly   609 ADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTKNPEQRLGCTGDE--NEIRKHPFFAKLDWK 671
            ..:|..:|..|:..|:.:|...|..|..::...|..:|.:|.| .|.|  :.:::||||..:|||
plant   255 DASEWLIFQRIIARDIKFPNHFSEAARDLIDRLLDTDPSRRPG-AGSEGYDSLKRHPFFKGVDWK 318

  Fly   672 ELEKR---NIKPPFRPKMKNP-RDANNFDAEFTKEDPVLTPIGN--------EVVRCINQDEF 722
            .|..:   .:.|....:..:| ||.:.::.....:..||...|:        .:.|..:.|.|
plant   319 NLRSQTPPKLAPDPASQSASPERDGSPWNPTHVGDTSVLQNDGHNGLSESSGSITRLASIDSF 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388
STKc_nPKC_epsilon 412..729 CDD:270743 105/336 (31%)
AT3G10540NP_187665.2 STKc_PDK1 43..312 CDD:270733 91/271 (34%)
PH_3 383..485 CDD:434057
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.